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Acute myeloid leukemia cell surface antigens (Category) (AML cell surface antigens)

Target
AML cell surface antigens
Molecular classification
Cell surface proteins, Membrane receptors, Surface glycoproteins, Cytokine receptors, Adhesion molecules, C-type lectins, RNA-binding proteins (when surface-localized)
01

Overview

Acute myeloid leukemia cell surface antigens represent a diverse collection of membrane-associated proteins that are differentially expressed on malignant myeloid cells compared to normal hematopoietic cells. These antigens span multiple molecular classes including cytokine receptors, adhesion molecules, C-type lectins, and unexpectedly, RNA-binding proteins that localize to the cell surface. The expression landscape of these antigens is highly heterogeneous, varying across AML genetic subtypes and differentiation stages. Modern single-cell RNA sequencing combined with mass spectrometry-based surfaceome profiling has revealed that AML cells at different maturation stages express distinct surface antigen profiles[1][2]. This complexity has been a major obstacle to developing effective antibody-based immunotherapies for AML, in contrast to the success seen in other hematological malignancies. Recent advances have identified several categories of therapeutically relevant surface antigens. Pan-AML markers like CD33 and CD123 are expressed across multiple AML subtypes but may also be present on normal myeloid progenitors. Leukemic stem cell-selective markers such as CLL-1, CD96, and TIM3 show enrichment on the CD34+CD38- LSC population compared to normal HSCs, though expression is often incomplete within the LSC compartment[5]. A particularly promising recent discovery is cell surface nucleophosmin (csNPM1), which forms organized nanodomains with glycosylated RNAs and other RNA-binding proteins on cancer cell surfaces. csNPM1 is expressed in a mutation-agnostic manner on primary AML blasts and leukemic stem cells but not on normal hematopoietic stem cells, making it an attractive therapeutic target[3]. Subtype-specific markers have also been identified, such as those enriched in KMT2A-rearranged AML, where surfaceome analysis revealed antigens expressed homogeneously on >90% of blast cells in affected patients[2]. The identification of 60 genes significantly overexpressed in immature AML HSC-like cells compared to normal HSCs, with 39 confirmed at the protein level and 23 nearly universally expressed across specimens, provides a rich landscape for therapeutic development[1]. The therapeutic strategy for targeting these antigens is evolving beyond traditional antibody-drug conjugates to include CAR-T cell therapies, bispecific antibodies, and mRNA vaccines. Patient stratification based on immune profiling has identified distinct immune subtypes (such as immune-hot immunosuppressive vs immune-cold phenotypes) that may determine optimal candidates for vaccination strategies[4].

Other names
AML surface markersAML cell surface markersleukemic cell surface antigensAML surfaceome antigens
02

Mechanism of action

Antibody-dependent cellular cytotoxicity (ADCC); Complement-dependent cytotoxicity (CDC); Direct cellular cytotoxicity through drug conjugation; CAR-T cell targeting; Immune checkpoint modulation

03

Biological functions

Cell differentiation and maturationSignal transductionImmune recognitionCell adhesion and migrationHematopoietic stem cell maintenanceApoptosis regulation
04

Disease associations

Leukemogenesis in acute myeloid leukemiaLeukemic stem cell maintenanceDisease progression and relapseImmune evasion
05

Safety considerations

On-target, off-tumor toxicity due to expression on normal myeloid progenitorsMyelosuppression and cytopeniaRisk of targeting normal hematopoietic stem cells leading to prolonged bone marrow suppressionHeterogeneous expression patterns within individual patients may lead to incomplete disease eradicationCytokine release syndrome with antibody or CAR-T therapiesDevelopment of antigen-negative escape variantsLimited efficacy of CD33-targeting approaches as monotherapy
06

Interacting drugs

Gemtuzumab ozogamicin (anti-CD33)

3 more in the full profile.

07

Biomarkers

CD33 (expressed in most AML cases)CD123 (IL3RA) - expressed on leukemic blastsCD13 (myeloid antigen)Nucleophosmin (NPM1) when surface-localized (csNPM1) - mutation-agnostic marker present on blasts and leukemic stem cells but not normal hematopoietic stem cellsC-type lectin-like molecule-1 (CLL-1) - expressed in 92% of AML patients, with median 33% expression in LSC compartmentCD96 (Tactile) - elevated in 65% of AML LSC compartmentsTIM3 - negative regulator of T cell immunityCD47 - "don't eat me" signalCD32CD25CD93 - expressed by KMT2Ar AML stem cellsMultiple unnamed antigens identified through surfaceome analysis showing >90% blast expression in KMT2Ar samplesIL3RA (CD123) (as part of immature leukemic cell markers)FLT3 (as part of immature leukemic cell markers)CD37 (as part of immature leukemic cell markers)TNFRSF10B (as part of immature leukemic cell markers)23 genes detected in over 80% of specimens (nearly universal expression) (as part of immature leukemic cell markers)CDH23 (Cadherin-23) (novel mRNA vaccine candidate)LRP1 (Low-density lipoprotein receptor-related protein 1) (novel mRNA vaccine candidate)MEFV (Mediterranean fever) (novel mRNA vaccine candidate)MYOF (Myoferlin) (novel mRNA vaccine candidate)SLC9A9 (Solute carrier family 9 member A9) (novel mRNA vaccine candidate)

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