Target intelligence / Profile preview

Cyclin K (CCNK) (CCNK)

Target
CCNK
Molecular classification
Enzyme (cyclin regulatory subunit)
01

Overview

Cyclin K (CCNK) is a regulatory cyclin that predominantly exists as the 65-kDa isoform (cyclin K1) across human tissues, encoded by alternative splicing of the CCNK gene. It forms distinct complexes with cyclin-dependent kinase 12 (CDK12) or CDK13, stabilizing these kinases and enabling their phosphorylation of serine 2 in the C-terminal domain (CTD) of RNA polymerase II. This activity drives transcriptional elongation and expression of DNA damage response genes (e.g., BRCA1, ATR), maintaining genomic stability. CDK12/Cyclin K has a unique structure with a C-terminal kinase extension in CDK12 that enhances ATP binding and substrate specificity, particularly for Ser7-prephosphorylated CTD. Depletion of Cyclin K mimics CDK12 loss, causing overlapping phenotypes like genomic instability and reduced Ser2 phosphorylation. Recent molecular glues exploit the CDK12/Cyclin K interface to recruit DDB1-CUL4 E3 ligase for Cyclin K ubiquitination and degradation, offering potential cancer therapeutic strategies despite on-target risks like DNA repair defects

Other names
Cyclin K1 (predominant 65-kDa isoform)CycKcyclin K1
02

Mechanism of action

Forms heterodimeric complex with CDK12 (or CDK13) to activate kinase activity for CTD Ser2 phosphorylation of RNA polymerase II; promotes transcriptional elongation of specific genes; targeted degradation via molecular glues that bridge CDK12 to DDB1-CUL4 E3 ligase complex, leading to ubiquitination and proteasomal degradation of cyclin K

03

Biological functions

Transcriptional elongationRNA polymerase II C-terminal domain (CTD) phosphorylation at Ser2Gene expression regulationGenomic stability maintenanceDNA damage response (via regulation of genes like BRCA1, ATR, FANCI, FANCD2)
04

Disease associations

Cancer (genomic instability when depleted)
05

Safety considerations

Genomic instability upon depletion (e.g., reduced BRCA1 expression)Cell death via dual CDK12/CDK13 pathway inhibition
06

Interacting drugs

SR-4835 (CDK12 inhibitor promoting cyclin K degradation)

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