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Deoxyribonucleic acid (DNA) and DNA synthesis machinery (DNA)

Target
DNA
Molecular classification
Nucleic acid, Enzyme
01

Overview

Deoxyribonucleic acid (DNA) and the associated DNA synthesis machinery represent the critical cellular targets for the active metabolites of gemcitabine, a pyrimidine antimetabolite used extensively in cancer therapy (StatPearls, 2023). Gemcitabine is a prodrug that requires intracellular conversion into gemcitabine diphosphate (dFdCDP) and gemcitabine triphosphate (dFdCTP) to exert its cytotoxic effects (PubChem, CID 60750). dFdCTP is incorporated into the DNA strand by DNA polymerases during the S-phase of the cell cycle, where it induces "masked chain termination" (Plunkett et al., 1995). This process allows for the addition of only one additional nucleotide after the analog, which prevents the 3' to 5' exonuclease activity of DNA polymerase from excising the drug, ultimately leading to DNA strand breaks and programmed cell death (Miniotti et al., 2021). Concurrently, dFdCDP inhibits ribonucleotide reductase, the enzyme responsible for producing deoxyribonucleotides, thereby lowering the concentration of competing natural nucleotides and potentiating the drug's efficacy (Heinemann et al., 1990). This multi-faceted attack on DNA integrity and synthesis makes it a potent target for treating various solid tumors, including pancreatic and lung carcinomas (FDA Label, Gemzar).

Other names
DNADeoxyribonucleic acidDNA replication machineryDNA polymerase complexGenomic DNA
02

Mechanism of action

Gemcitabine metabolites (dFdCTP and dFdCDP) target DNA synthesis through two primary mechanisms: dFdCTP acts as a competitive substrate for DNA polymerase, leading to "masked chain termination" after the addition of one subsequent nucleotide, which prevents repair; dFdCDP inhibits ribonucleotide reductase (RNR), depleting the intracellular pool of deoxycytidine triphosphate (dCTP) and enhancing drug incorporation into DNA (StatPearls, 2023; Plunkett et al., 1995).

03

Biological functions

DNA replicationCell cycleApoptosisCell proliferation
04

Disease associations

CancerPancreatic cancerNon-small cell lung cancerBladder cancerBreast cancerOvarian cancer
05

Safety considerations

Myelosuppression (neutropenia, thrombocytopenia, anemia)Hemolytic uremic syndrome (HUS)Pulmonary toxicity (interstitial pneumonitis)HepatotoxicityCapillary leak syndrome
06

Interacting drugs

Gemcitabine
07

Biomarkers

Human equilibrative nucleoside transporter 1 (hENT1)Deoxycytidine kinase (DCK)Ribonucleotide reductase catalytic subunit M1 (RRM1)Ribonucleotide reductase regulatory subunit M2 (RRM2)Cytidine monophosphate kinase 1 (CMPK1)

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