Target intelligence / Profile preview

DNA polymerase alpha (α); DNA polymerase beta (β) (Pol α; Pol β)

Target
Pol α; Pol β
Molecular classification
Enzyme
01

Overview

DNA polymerase alpha and DNA polymerase beta are central mammalian enzymes required for DNA replication (alpha) and nuclear DNA repair (beta), respectively[2][4][6][10]. Cytarabine, an antimetabolite and nucleoside analog, is a prodrug metabolized to its active triphosphate form (ara-CTP) inside cells, where it inhibits DNA polymerase alpha—hindering DNA replication—and DNA polymerase beta—blocking DNA repair. Additionally, the triphosphate form is incorporated into DNA, resulting in chain termination and apoptosis, particularly in cells actively synthesizing DNA (S-phase)[3][5][1][9]. These processes form the basis for cytarabine's effectiveness (and toxicity) in treating leukemias and other rapidly proliferating malignancies. Notably, resistance can arise via upregulation of translesion synthesis polymerases (e.g., polymerase eta), which are able to bypass the block created by cytarabine incorporation[7][9].

Other names
DNA pol alphaDNA pol βDNA-dependent DNA polymerasesDeoxynucleotidyl transferases
02

Mechanism of action

Cytarabine acts as a nucleoside analog that is converted (in cells) to cytarabine-5'-triphosphate (ara-CTP), which inhibits DNA polymerase α (impairing DNA replication) and DNA polymerase β (blocking DNA repair), and gets incorporated into DNA, causing chain termination and cell death

03

Biological functions

DNA synthesisDNA replication (alpha)DNA repair (beta)
04

Disease associations

Cancer (especially leukemia)Other diseases related to errors in DNA repair/replication
05

Safety considerations

Myelosuppression (bone marrow toxicity)Resistance (high activity of DNA repair enzymes, e.g., polymerase eta)Dose-limiting cytopeniasNeurological toxicity (high-dose cytarabine)
06

Interacting drugs

Cytarabine (Ara-C)

2 more in the full profile.

07

Biomarkers

γH2AX (biomarker of DNA double-strand breaks caused by cytarabine)Caspase-3 activation (apoptosis marker with cytarabine/VPA synergy in AML)

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