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Herpes simplex virus type 2 DNA polymerase (UL30) is the essential enzyme responsible for replicating the double-stranded DNA genome of HSV-2 during its lytic phase [1, 15]. As a Family B DNA polymerase, it consists of a large catalytic subunit (UL30) that associates with a processivity factor (UL42) to perform highly efficient and faithful DNA synthesis [12, 15]. This enzyme is the primary pharmacological target for standard-of-care anti-herpetic drugs, including nucleoside analogues like acyclovir and valacyclovir, which act as chain terminators once incorporated into the viral DNA strand [11]. Pyrophosphate analogues like foscarnet also target this enzyme by blocking the pyrophosphate-binding site of the polymerase [7]. While these therapies are highly effective at controlling outbreaks and reducing viral shedding, they do not eradicate the latent virus stored in the lumbosacral ganglia [10, 18]. Clinical challenges include the development of drug-resistant strains, particularly in immunocompromised patients, which typically arise from mutations in the UL30 or thymidine kinase genes [10, 15].
Nucleoside analogues are phosphorylated by viral and cellular kinases to active triphosphates that competitively inhibit the viral DNA polymerase and cause premature DNA chain termination; pyrophosphate analogues non-competitively inhibit the polymerase by binding directly to the pyrophosphate-binding site [7, 11, 15].
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