Target intelligence / Profile preview

Histone deacetylase (Class I, II, and IV) (HDAC (Class I/II/IV))

Target
HDAC (Class I/II/IV)
Molecular classification
Enzyme, Histone modification
01

Overview

Histone deacetylases (HDACs) are a family of zinc-dependent enzymes that catalyze the removal of acetyl groups from lysine residues on histone and non-histone proteins, leading to chromatin condensation and transcriptional repression[1][5]. HDACs are divided into four classes based on similarity to yeast orthologs: class I (HDAC1, HDAC2, HDAC3, HDAC8), class II (further divided to IIa and IIb), and class IV (HDAC11)[3]. The term "Class I/II/IV HDACs" collectively refers to all zinc-dependent histone deacetylase family members except class III (sirtuins), which are NAD-dependent and structurally distinct[3][5]. These enzymes play central roles in epigenetic regulation, affecting gene expression, cellular differentiation, development, survival, and disease states such as cancer, neurological disorders, and inflammation[1][4][5]. Pharmacological inhibition of HDACs by drugs such as vorinostat, romidepsin, belinostat, and panobinostat is an established therapeutic strategy in oncology, though toxicity and lack of isoform-selectivity remain clinical challenges[1]. Biomarkers for HDAC activity include acetyl-histone levels, while ongoing research seeks safer, more selective inhibitors due to the broad and context-dependent effects of HDAC blockade.

Other names
Histone deacetylasesHDACsHDAC1HDAC2HDAC3HDAC8 (Class I)HDAC4HDAC5HDAC6HDAC7HDAC9HDAC10 (Class II)HDAC11 (Class IV)
02

Mechanism of action

Inhibition of deacetylase activity resulting in increased histone acetylation and gene expression - Non-selective or class/isoform-selective inhibition, depending on drug[1][2]

03

Biological functions

Regulation of gene transcriptionEpigenetic chromatin remodelingCell cycle regulationCell proliferationCell deathApoptosisMemory formation and synaptic plasticity
04

Disease associations

CancerNeurodegenerative diseaseInflammationCardiovascular diseaseOther (examples: schizophrenia, as indicated by gene expression studies[5])
05

Safety considerations

Non-selective toxicityOff-target effects due to inhibition of multiple isoforms[1][2]Potential effects on non-histone substrates and broad physiological processes
06

Interacting drugs

Vorinostat

4 more in the full profile.

07

Biomarkers

Levels of acetylated histone proteins (as a pharmacodynamic biomarker)Expression levels of specific HDAC proteins in target tissues

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