Target intelligence / Profile preview

Histone deacetylase (primarily Class I and HDAC6) (HDAC)

Target
HDAC
Molecular classification
Enzyme, Histone modification, Hydrolase, Deacetylase
01

Overview

Histone deacetylases (HDACs) are essential enzymes that catalyze the removal of acetyl groups from lysine residues on both histone and non-histone proteins. Class I HDACs (HDAC1, 2, 3, and 8) are predominantly nuclear and play a critical role in regulating chromatin structure and gene transcription, often acting as transcriptional corepressors (UniProt: P50851). HDAC6, a Class IIb member, is primarily localized in the cytoplasm where it regulates diverse processes such as microtubule-dependent transport and the degradation of misfolded proteins via the aggresome pathway (UniProt: Q9UBN7). Overexpression or dysregulation of these enzymes is frequently observed in various malignancies, leading to the silencing of tumor suppressor genes and promotion of cell survival (PubMed: 22429471). Consequently, HDACs have become major therapeutic targets, particularly in oncology. Drugs targeting Class I and HDAC6, such as Vorinostat and Panobinostat, work by inducing hyperacetylation, which results in cell cycle arrest, differentiation, and apoptosis of malignant cells (NIH: StatPearls - Histone Deacetylase Inhibitors). Beyond cancer, these enzymes are being investigated for their roles in neurodegenerative diseases and inflammatory conditions due to their broad impact on cellular homeostasis (PubMed: 23911236).

Other names
HDACLysine deacetylaseHDHDC
02

Mechanism of action

HDAC inhibitors bind to the zinc-dependent catalytic site of histone deacetylases, blocking the removal of acetyl groups from lysine residues on histones and non-histone proteins. This leads to hyperacetylation, which promotes an open chromatin structure (euchromatin) and reactivates the expression of tumor suppressor genes, induces cell cycle arrest, and triggers apoptosis. Inhibition of HDAC6 specifically increases the acetylation of cytoplasmic proteins like alpha-tubulin, disrupting cell motility and the aggresome-mediated degradation of misfolded proteins (PubMed: 22429471; NIH: StatPearls - Histone Deacetylase Inhibitors).

03

Biological functions

Gene expression regulationChromatin remodelingCell cycle regulationApoptosisProtein stabilityMicrotubule dynamics
04

Disease associations

CancerHematological malignancyNeurodegenerative diseaseInflammationCardiovascular disease
05

Safety considerations

Thrombocytopenia (FDA: Zolinza Label)Neutropenia (PubMed: 21436300)Gastrointestinal toxicity (NIH: StatPearls)FatigueQT interval prolongation (PubMed: 17909004)Teratogenicity
06

Interacting drugs

Vorinostat

6 more in the full profile.

07

Biomarkers

Histone H3/H4 acetylation levels (PubMed: 16707602)Acetylated alpha-tubulin (PubMed: 22429471)HR23B protein expression (PubMed: 21149615)CDKN1A (p21) expression

Beyond the preview

Go deeper on Histone deacetylase (primarily Class I and HDAC6) (HDAC).

Explore the evidence, development activity, and competitive landscape with Gosset’s full data platform.

Drug pipeline

Full profile access

Explore the programs pursuing this target and their development progress.

  • Drug candidates
  • Developers
  • Development stage

Clinical trials

Full profile access

Follow the clinical studies evaluating therapies directed at this target.

  • Trial design
  • Status
  • Readouts

Competitive landscape

Full profile access

Compare approaches across drug candidates, modalities, and indications.

  • Programs
  • Modalities
  • Indications

Literature & evidence

Full profile access

Investigate the research and source evidence behind target biology and development.

  • Publications
  • Sources
  • Analysis

Patents

Full profile access

Explore patent activity around therapies and technologies addressing this target.

  • Patents
  • Assignees
  • Technologies

Research & analysis

Full profile access

Connect target biology, drug development, and emerging evidence in your research.

  • Biology
  • Development news
  • Analysis

Bring the full picture into focus.

See how Gosset can support your research on Histone deacetylase (primarily Class I and HDAC6) (HDAC).

Explore the full profile

Gosset Free

Get started with Gosset.

Enter your work email and we’ll be in touch with next steps.

Work email preferred.

Book a call