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Host cell protein involved in RNA processing, translation, folding, or degradation

Molecular classification
RNA-binding protein, Enzyme, Ribonucleoprotein, Splicing factor, Helicase (DEAD-box/DEAH-box), Translation initiation factor, Polyadenylation factor, Nuclear export factor
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Overview

Host cell proteins involved in RNA processing, translation, folding, and degradation are a large, diverse group essential for post-transcriptional regulation of gene expression. This category includes RNA-binding proteins (RBPs) such as heterogeneous nuclear ribonucleoproteins (hnRNPs), splicing factors, RNA helicases, translation initiation factors, polyadenylation factors, and nuclear export proteins. These proteins facilitate every step of RNA maturation, nuclear export, translation, and turnover. In the context of viral infection, many of these proteins become critical determinants of host susceptibility, as viruses frequently hijack, inhibit, or reprogram the host RNA machinery for their own replication. Some of the most prominent therapeutic strategies in infection and cancer involve modulation of these host factors[1][3][5][6][7]. However, targeting this group presents considerable safety challenges due to the essential nature of many of its members for cellular health.

Other names
RNA-binding proteinRBPhost RNA metabolism proteinsplicing factortranslation factorribonucleoprotein
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Mechanism of action

Inhibition of RNA splicing/polyadenylation to suppress host protein synthesis\nModulation of nuclear export to block viral transcript trafficking\nInhibition or modulation of translation factors\nTargeting RNA stability or degradation machinery (e.g., P-bodies)

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Biological functions

RNA processing (capping, splicing, polyadenylation, modification)RNA translationRNA foldingRNA nuclear exportRNA degradationRegulation of gene expressionHost-virus interaction
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Disease associations

Infection (viral replication, host antiviral response)CancerNeurodegenerative diseaseFlammationOther (genetic disorders of splicing/folding)
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Safety considerations

High risk of off-target effects due to disruption of essential host RNA processesPossible shutdown of host protein synthesis leading to cellular toxicityInterference with normal immune response and cell viability
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Interacting drugs

Antiviral drugs (targeting nuclear export machinery, RNA processing, or translation, such as inhibitors of NXF1, CRM1, splicing, and polyadenylation)

1 more in the full profile.

07

Biomarkers

Expression levels and subcellular localization of RBPs (e.g., hnRNPs, NS1-BP) may serve as biomarkers of viral infection or RNA dysregulationSplicing factor and nuclear export factor expression in cancers/viral infections

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