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Lysine-specific demethylase 4A, Lysine-specific demethylase 4B, Lysine-specific demethylase 4C, Lysine-specific demethylase 4D (KDM4A (JMJD2A), KDM4B (JMJD2B), KDM4C (JMJD2C), KDM4D (JMJD2D))

Target
KDM4A (JMJD2A), KDM4B (JMJD2B), KDM4C (JMJD2C), KDM4D (JMJD2D)
Molecular classification
Enzyme, Histone lysine demethylase, Epigenetic regulator, Fe(II)- and alpha-ketoglutarate-dependent dioxygenase, JmjC domain-containing protein, Jumonji C demethylase family
01

Overview

Lysine-specific demethylase 4A–D (KDM4A–D) are a family of JmjC domain-containing enzymes that catalyze the removal of di- and tri-methyl marks from lysine residues on histone H3, specifically at lysines 9 (H3K9) and 36 (H3K36). These demethylases require Fe(II) and alpha-ketoglutarate as cofactors. The KDM4 family plays a central role in epigenetic regulation of chromatin, transcription, DNA replication timing, DNA damage response, and cell cycle control. Overexpression or dysregulation of KDM4A–D, particularly KDM4A, is implicated in various cancers and can lead to altered gene expression, enhanced proliferation, and chromosomal instability. These enzymes are considered promising therapeutic targets, and several small-molecule inhibitors are under development, particularly for oncology indications.

Other names
JMJD2AJHDM3ATDRD14BKIAA0677 (for KDM4A)JMJD2BJMJD2CJMJD2D (for B–D members)Histone lysine demethylase subfamily 4
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Mechanism of action

Competitive inhibition of the alpha-ketoglutarate cofactor binding site in the JmjC domain; Inhibition of histone demethylase activity, leading to sustained histone methylation and gene repression/activation

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Biological functions

Epigenetic regulation of gene expressionRemoval of methyl groups from histone H3 lysines (K9, K36)Cell cycle progression and controlRegulation of DNA replication and chromatin organizationRegulation of protein synthesis and translationCellular differentiationApoptosis and DNA damage responseCell proliferation (especially in cancer)
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Disease associations

Cancer (oncogene activity, overexpression in prostate, colon, lung, breast cancers, etc.)Chromosomal instability and genomic instabilityInfertility (in animal models with certain gene knockouts)
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Safety considerations

Potential for off-target epigenetic effects due to the broad role in gene regulationPossible interference with normal cell cycle progression, development, and differentiation
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Interacting drugs

Several small-molecule inhibitors of KDM4 family have been studied (e.g., N-oxalylglycine derivatives, JIB-04), but no approved clinical drugs specifically targeting KDM4A–D as of now
07

Biomarkers

KDM4A overexpression can serve as a biomarker in certain cancers (e.g., prostate, breast, lung, colon)H3K9me3 and H3K36me3 methylation states may reflect KDM4A activity/inhibition

Beyond the preview

Go deeper on Lysine-specific demethylase 4A, Lysine-specific demethylase 4B, Lysine-specific demethylase 4C, Lysine-specific demethylase 4D (KDM4A (JMJD2A), KDM4B (JMJD2B), KDM4C (JMJD2C), KDM4D (JMJD2D)).

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