Target intelligence / Profile preview

Programmable genomic DNA loci (BCL11A enhancer and HBB gene)

Molecular classification
Genomic DNA, Regulatory element, Gene
01

Overview

Programmable genomic DNA loci related to sickle cell disease (SCD) refer to specific chromosomal regions targeted by gene-editing technologies to restore normal hemoglobin function. The primary targets include the HBB gene, which harbors the causative mutation for SCD, and regulatory elements like the BCL11A erythroid-specific enhancer and the HBG1/HBG2 promoters [1][2]. By disrupting the BCL11A enhancer or modifying the HBG promoters, therapeutic agents can reactivate the production of fetal hemoglobin (HbF), which prevents the polymerization of sickle hemoglobin (HbS) [1][4]. These modifications are typically performed ex vivo in hematopoietic stem and progenitor cells (HSPCs) using CRISPR-Cas9, base editors, or lentiviral vectors before being re-infused into the patient [2][3]. The 'undisclosed target' mentioned in pipeline descriptions often refers to proprietary genomic sites intended to improve the efficiency of erythropoiesis or the persistence of edited cells [2]. This approach represents a curative paradigm for SCD by addressing the underlying genetic defect or its physiological consequences at the DNA level [1][4]. Sources: [1] Frangoul, H., et al. (2021). CRISPR-Cas9 Gene Editing for Sickle Cell Disease and Beta-Thalassemia. New England Journal of Medicine. [2] Beam Therapeutics. (2022). Pipeline and Platform Overview. [3] Cavazzana, M., et al. (2017). Gene Therapy in a Patient with Sickle Cell Disease. New England Journal of Medicine. [4] Steinberg, M. H. (2020). Fetal hemoglobin in sickle cell anemia. Blood Reviews.

Other names
BCL11A erythroid-specific enhancerHBB gene locusHBG1/HBG2 promoterFetal hemoglobin regulatory elementsBeta-globin gene cluster
02

Mechanism of action

Targeted genomic modification via CRISPR-Cas9, base editing, or lentiviral gene addition to disrupt repressors (e.g., BCL11A) or correct mutations (HBB), thereby restoring functional hemoglobin production.

03

Biological functions

Hemoglobin synthesis regulationErythropoiesisGene expression regulationTranscriptional repression
04

Disease associations

Sickle cell diseaseBeta-thalassemia
05

Safety considerations

Off-target editingGenotoxicityInsertional mutagenesisClonal hematopoiesisMyeloablation-related toxicities
06

Interacting drugs

Exagamglogene autotemcel

3 more in the full profile.

07

Biomarkers

Fetal hemoglobin (HbF) levelsTotal hemoglobinAllelic editing frequencyVaso-occlusive crisis (VOC) rateReticulocyte count

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