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Runt-related transcription factor 1; RUNX1 partner transcriptional co-repressor 1 fusion mRNA (RUNX1-RUNX1T1) (RUNX1-RUNX1T1)

Target
RUNX1-RUNX1T1
Molecular classification
Fusion transcript, Oncogene, Transcription factor (encoded protein)
01

Overview

RUNX1-RUNX1T1 fusion mRNA is the chimeric transcript resulting from the t(8;21)(q22;q22) chromosomal translocation, a defining genetic event in approximately 10% of adult acute myeloid leukemia (AML) cases (Source: National Cancer Institute). This fusion joins the DNA-binding domain of the Runt-related transcription factor 1 (RUNX1) with the nearly complete RUNX1 partner transcriptional co-repressor 1 (RUNX1T1) (Source: UniProt). The resulting fusion protein acts as a dominant-negative regulator, recruiting corepressors like histone deacetylases (HDACs) to RUNX1 target genes, thereby blocking myeloid differentiation and promoting leukemic transformation (Source: PubMed ID 22510870). As a therapeutic target, the mRNA is susceptible to sequence-specific degradation via RNA interference (siRNA) or antisense oligonucleotides, which can restore normal hematopoietic signaling in preclinical models (Source: PubMed ID 15150103). Clinically, the quantification of RUNX1-RUNX1T1 mRNA levels via RT-qPCR is the gold standard for monitoring minimal residual disease (MRD) and predicting clinical relapse (Source: PubMed ID 30617275). While direct mRNA-targeting drugs are largely in the experimental phase, the fusion's downstream epigenetic effects are targeted by HDAC inhibitors like vorinostat in clinical trials (Source: ClinicalTrials.gov). Challenges in targeting this molecule include the risk of affecting wild-type RUNX1, which is essential for normal blood cell development (Source: PubMed ID 12612653).

Other names
AML1-ETORUNX1-MTG8t(8;21) fusion transcriptCBFA2-ETORUNX1-RUNX1T1 fusion transcript
02

Mechanism of action

RNA interference (siRNA), antisense oligonucleotide-mediated degradation, or inhibition of the encoded fusion protein's recruitment of histone deacetylases (HDACs).

03

Biological functions

Transcriptional repressionInhibition of myeloid differentiationEnhanced hematopoietic stem cell self-renewalEpigenetic modification
04

Disease associations

Acute myeloid leukemia (AML)
05

Safety considerations

Potential for off-target silencing of wild-type RUNX1 essential for normal hematopoiesisSystemic delivery challenges for RNA-based therapeuticsDevelopment of secondary mutationsHematotoxicity
06

Interacting drugs

Vorinostat

3 more in the full profile.

07

Biomarkers

t(8;21)(q22;q22) chromosomal translocationRUNX1-RUNX1T1 transcript levels (RT-qPCR)CD34+ CD38- leukemic stem cell markers

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