Target intelligence / Profile preview

SH3 and multiple ankyrin repeat domains 3 (SHANK3) pre-messenger RNA (SHANK3 pre-mRNA)

Target
SHANK3 pre-mRNA
Molecular classification
RNA, Pre-messenger RNA, Messenger RNA
01

Overview

SH3 and multiple ankyrin repeat domains 3 (SHANK3) pre-messenger RNA and messenger RNA are critical therapeutic targets for addressing haploinsufficiency in neurodevelopmental disorders. The SHANK3 gene encodes a master scaffolding protein essential for the structural and functional organization of the postsynaptic density in excitatory synapses (UniProt Q9BYB0). Mutations or deletions of one allele of SHANK3 lead to Phelan-McDermid syndrome and are a significant genetic cause of autism spectrum disorder (PubMed: 35110414). Therapeutic strategies focusing on the pre-mRNA or mRNA aim to restore protein levels by modulating alternative splicing or enhancing the stability of the transcript. Specifically, antisense oligonucleotides (ASOs) are being designed to prevent the inclusion of non-productive exons or to promote the translation of the remaining healthy allele (PubMed: 31601711). Precise titration of SHANK3 levels is vital, as both deficiency and overabundance of the protein are associated with distinct neurological pathologies, including manic-like behaviors in cases of overexpression.

Other names
Proline-rich synapse-associated protein 2ProSAP2SH3 and multiple ankyrin repeat domains 3 mRNASHANK3 mRNASCZD15
02

Mechanism of action

Targeted Augmentation of Nuclear Gene Expression (TANGO) to increase productive mRNA levels; Splice modulation to prevent non-productive splicing; RNA stabilization to increase protein translation.

03

Biological functions

Synaptic scaffoldingPostsynaptic density organizationDendritic spine morphogenesisGlutamatergic neurotransmissionActin cytoskeleton remodeling
04

Disease associations

Phelan-McDermid syndrome (22q13.3 deletion syndrome)Autism spectrum disorderSchizophreniaIntellectual disability
05

Safety considerations

Risk of SHANK3 overexpression leading to neuropsychiatric symptomsOff-target RNA binding and hybridization-dependent toxicityChallenges in delivery across the blood-brain barrierPotential for inflammatory responses to synthetic oligonucleotides
06

Interacting drugs

Antisense oligonucleotides (experimental)

1 more in the full profile.

07

Biomarkers

SHANK3 protein levels in cerebrospinal fluidSynaptic density (measured via PET imaging)EEG power spectral density patternsClinical severity scores (e.g., VABS-II, ABC)

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