Target intelligence / Profile preview

Spike glycoprotein of SARS-CoV-2 (Omicron LP.8.1 variant) (S protein)

Target
S protein
Molecular classification
Viral fusion protein, Class I fusion protein, Viral surface glycoprotein
01

Overview

The spike glycoprotein of SARS-CoV-2 Omicron LP.8.1 variant is a large, trimeric class I viral fusion protein that protrudes from the viral envelope and is essential for viral entry into host cells. It mediates attachment by binding to the human angiotensin-converting enzyme 2 (ACE2) receptor through its receptor-binding domain (RBD) and facilitates membrane fusion, enabling the viral genome to enter the host cell[1][2][3][4][5]. The Omicron variant spike glycoprotein is notable for a large number of mutations, especially in the RBD and N-terminal domain, which enhance affinity for ACE2 and confer substantial resistance to many neutralizing antibodies, contributing to increased transmissibility and immune evasion[2]. The spike protein is the primary antigen targeted by COVID-19 vaccines and therapeutics. As the main immunodominant surface protein, it is highly glycosylated and conformationally dynamic, presenting a critical determinant of viral infectivity, host range, and tissue tropism[1][4][5].

Other names
Spike proteinS glycoproteinS proteinE2 (historic name)
02

Mechanism of action

Inhibition of spike–ACE2 interaction (prevents viral entry) Neutralization of virus by antibody binding to receptor-binding domain (RBD) Inhibition of conformational changes needed for membrane fusion Induction of immune response to spike protein (vaccination)

03

Biological functions

Mediates viral entry into host cellsBinds host cell receptor (ACE2)Facilitates membrane fusionMain target of neutralizing antibodies
04

Disease associations

Infection (COVID-19)Immune evasionViral transmission
05

Safety considerations

Immune-driven selection of escape variants (antigenic drift)Risk of antibody-dependent enhancement (theoretical, not confirmed for COVID-19 vaccines)Waning immunity/immune escape by new variantsReduced efficacy of previously approved monoclonal antibodies against Omicron subvariants
06

Interacting drugs

COVID-19 vaccines targeting S protein (e.g., mRNA-1273 [Moderna], BNT162b2 [Pfizer], ChAdOx1 [AstraZeneca])

3 more in the full profile.

07

Biomarkers

Seropositivity/antibody titers to spike protein or its RBD for previous infection or vaccine responseS gene target failure (SGTF) in PCR testing as a marker of specific variants (such as Omicron)

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