Target intelligence / Profile preview

TAR DNA-binding protein 43 (TDP-43) aggregates (TDP-43)

Target
TDP-43
Molecular classification
RNA-binding protein, DNA-binding protein, Prion-like protein
01

Overview

TAR DNA-binding protein 43 (TDP-43) is a critical RNA-binding protein primarily located in the nucleus, where it regulates RNA splicing, transport, and stability (UniProt Q13148). In pathological conditions, TDP-43 misfolds and forms insoluble, hyperphosphorylated aggregates in the cytoplasm, a process associated with the depletion of functional nuclear TDP-43 (Neumann et al., Science, 2006). These aggregates are the primary pathological hallmark of Amyotrophic Lateral Sclerosis (ALS) and Frontotemporal Lobar Degeneration (FTLD), and they also contribute to Limbic-predominant Age-related TDP-43 Encephalopathy (LATE) (Nelson et al., Brain, 2019). Therapeutic approaches currently under investigation include antisense oligonucleotides to reduce protein levels (e.g., BIIB105, ClinicalTrials.gov NCT04494256), monoclonal antibodies to clear aggregates (e.g., NI-205), and small molecules designed to stabilize the protein's native conformation. A significant challenge in targeting TDP-43 is the protein's essential role in cellular homeostasis; therapies must selectively target toxic species while sparing the functional nuclear pool to prevent detrimental loss-of-function effects (Gao et al., Nature Communications, 2019).

Other names
TARDBPTDP43Pathological TDP-43TDP-43 inclusionsCytoplasmic TDP-43 aggregates
02

Mechanism of action

Antisense oligonucleotide-mediated reduction of protein expression, Monoclonal antibody-mediated clearance of pathological aggregates, Small molecule inhibition of protein phosphorylation and ubiquitination, Stabilization of the native monomeric protein state

03

Biological functions

RNA splicingRNA transportmRNA stabilityTranscriptional regulationStress granule formation
04

Disease associations

Amyotrophic lateral sclerosisFrontotemporal lobar degenerationLimbic-predominant age-related TDP-43 encephalopathyAlzheimer's disease
05

Safety considerations

Loss of essential nuclear RNA-processing functionsInduction of widespread splicing defectsPotential for off-target RNA bindingRisk of neurotoxicity from the mobilization of insoluble aggregates
06

Interacting drugs

BIIB105

2 more in the full profile.

07

Biomarkers

Phosphorylated TDP-43 (pTDP-43) in cerebrospinal fluidNeurofilament light chain (NfL) in plasmaStathmin-2 (STMN2) mRNA expression levelsUNC13A cryptic exon inclusion in RNA-seq

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