Target intelligence / Profile preview

Type II NADH:quinone oxidoreductase (NDH-2) (NDH-2)

Target
NDH-2
Molecular classification
Enzyme, Oxidoreductase, Flavoprotein, Peripheral membrane protein
01

Overview

Type II NADH:quinone oxidoreductase (NDH-2) is a peripheral membrane enzyme that serves as a critical component of the respiratory chain in various pathogenic bacteria and protozoa, such as Mycobacterium tuberculosis and Plasmodium falciparum (PubMed: 27001632, PNAS: 10510271). Unlike the multi-subunit, proton-pumping Type I NADH dehydrogenase (Complex I) found in humans, NDH-2 is a single-subunit, non-proton-pumping flavoprotein that utilizes a non-covalently bound FAD cofactor to catalyze the oxidation of NADH and the reduction of quinones (UniProt: P0A768, Wikipedia). It is essential for maintaining the cellular NADH/NAD+ redox balance and driving the electron transport chain, particularly in organisms that lack Complex I (PubMed: 26854231). Because NDH-2 is functionally and structurally distinct from human mitochondrial enzymes, it is considered a high-value target for the development of selective antimicrobial and antimalarial agents (NIH: PMC4826135). Therapeutic candidates, including phenothiazines and quinolone derivatives, target the enzyme's quinone-binding site to disrupt energy metabolism and induce pathogen lethality (PubMed: 28252965, RSC: 2026-01-05). The absence of this enzyme in human mitochondria minimizes the risk of direct mitochondrial toxicity, although potential cross-reactivity with human cytosolic homologs remains a consideration for drug design (Wikipedia, PubMed: 26854231).

Other names
Bacterial type II NADH–quinone oxidoreductaseAlternative NADH dehydrogenaseRotenone-insensitive NADH dehydrogenaseNDH-IINADH:quinone oxidoreductase type IINADH:menaquinone oxidoreductase
02

Mechanism of action

Inhibitors of NDH-2 typically function through competitive inhibition at the quinone-binding site (Q-site), blocking the transfer of electrons from the FAD cofactor to the quinone pool (PubMed: 28252965). This action disrupts the respiratory chain, leading to a depletion of intracellular ATP and an imbalance in the NADH/NAD+ ratio, which ultimately results in the death of the pathogenic organism (PNAS: 10510271, NIH: PMC4826135).

03

Biological functions

Electron transport chainRedox homeostasisEnergy metabolismNADH oxidation
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Disease associations

InfectionTuberculosisMalariaStaphylococcal infection
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Safety considerations

Potential cross-reactivity with human homologs such as AIFM2 (AMID)CNS side effects associated with phenothiazine-class inhibitorsSelectivity between bacterial and host mitochondrial enzymes
06

Interacting drugs

Thioridazine

5 more in the full profile.

07

Biomarkers

NADH/NAD+ ratioIntracellular ATP levelsBacterial load (CFU)

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