Target intelligence / Profile preview

Viral RNA-dependent RNA polymerase (RdRp) (RdRp)

Target
RdRp
Molecular classification
Enzyme (Source: UniProt, 2024), RNA-directed RNA polymerase (Source: IUBMB, 2023), Transferase (Source: BRENDA, 2023)
01

Overview

Viral RNA-dependent RNA polymerase (RdRp) is the central catalytic component of the viral replication machinery in RNA viruses, excluding retroviruses (Source: Nature Reviews Microbiology, 2022). It is responsible for synthesizing new RNA genomes and transcribing viral mRNA from an RNA template, a process essential for viral proliferation (Source: UniProt, 2024). The enzyme often functions as part of a larger replication-transcription complex (RTC) that includes other viral proteins such as helicases, exonucleases, and primases (Source: Cell, 2020). Because RdRp has no direct functional equivalent in human cells, it is a highly attractive target for broad-spectrum antiviral drugs (Source: Journal of Biological Chemistry, 2021). Most clinical inhibitors are nucleoside or nucleotide analogs that act as pro-drugs, which, once phosphorylated by host kinases, compete with natural nucleotides for incorporation into the nascent RNA strand, leading to chain termination (Source: NIH, 2023). Other agents, like Molnupiravir, induce an error catastrophe by causing excessive mutations during replication (Source: FDA, 2021). However, the high error rate of RdRp itself facilitates the rapid development of resistance mutations, posing a significant challenge for long-term efficacy (Source: Lancet Infectious Diseases, 2022).

Other names
RNA replicaseRNA-directed RNA polymeraseRdRp complexReplication-transcription complexViral replication machinery
02

Mechanism of action

Inhibition of viral RNA synthesis through competitive binding as nucleoside or nucleotide analogs, leading to premature chain termination or lethal mutagenesis (Source: Nature Reviews Drug Discovery, 2021).

03

Biological functions

Viral genome replication (Source: UniProt, 2024)RNA synthesis (Source: PubMed, 2022)Transcription (Source: Cell, 2020)
04

Disease associations

Infection (Source: WHO, 2023)
05

Safety considerations

Mitochondrial toxicity (Source: Nucleic Acids Research, 2020)Teratogenicity (Source: StatPearls, 2023)Emergence of drug-resistant variants (Source: Journal of Virology, 2021)Hepatotoxicity (Source: LiverTox, 2023)
06

Interacting drugs

Remdesivir (Source: NIH, 2023)

5 more in the full profile.

07

Biomarkers

Viral RNA load (Source: WHO, 2023)Resistance-associated substitutions (RASs) (Source: AASLD, 2022)Serum alanine aminotransferase (ALT) (Source: FDA, 2023)

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