Target intelligence / Profile preview

3-hydroxy-3-methylglutaryl-CoA lyase (HMGCL)

Target
HMGCL
Molecular classification
Enzyme, Lyase, Mitochondrial enzyme
01

Overview

3-hydroxy-3-methylglutaryl-CoA lyase (HMGCL) is a mitochondrial enzyme essential for the final step in ketogenesis, catalyzing the cleavage of (S)-3-hydroxy-3-methylglutaryl-CoA to yield acetoacetate and acetyl-CoA. This reaction provides ketone bodies as alternative energy substrates, especially vital for the brain during fasting or metabolic stress. HMGCL also plays a crucial role in leucine catabolism. The enzyme is encoded by the HMGCL gene, and mutations lead to HMGCL deficiency, an autosomal recessive disorder characterized by impaired ketogenesis and leucine metabolism. Clinically, deficiency manifests as hypoketotic hypoglycemia, metabolic acidosis, and risk of neurological injury, often presenting in infancy after fasting or illness. Alternative splicing generates isoforms with tissue-specific expression, and structural studies reveal HMGCL to be a (β/α)8 TIM barrel dimer that requires Mg²⁺ for activity.

Other names
Hydroxymethylglutaryl-CoA lyase, mitochondrialHMG-CoA lyaseHLHMGCL13-hydroxy-3-methylglutarate-CoA lyaseHydroxymethylglutaryl-CoA lyaseHydroxymethylglutaricaciduria3-hydroxymethyl-3-methylglutaryl-CoA lyase3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyaseMitochondrial 3-hydroxy-3-methylglutaryl-CoA lyase
02

Mechanism of action

Not applicable for classical pharmacological modulation; enzyme deficiency leads to disease, and management is via metabolic support rather than direct enzymatic modulation

03

Biological functions

Ketogenesis (production of ketone bodies)Leucine catabolism (breakdown of the amino acid leucine)Energy metabolismFatty acid metabolism
04

Disease associations

Inborn errors of metabolism (specifically 3-hydroxy-3-methylglutaryl-CoA lyase deficiency, HMGCLD)Metabolic acidosisHypoketotic hypoglycemia
05

Safety considerations

Acute metabolic crises (vomiting, seizures, coma) in deficiency statesNeurological damage due to hypoglycemia or acidosis in untreated patients
06

Biomarkers

Elevated organic acids in urine (e.g., 3-hydroxy-3-methylglutaric acid, 3-methylglutaconic acid)Hypoketotic hypoglycemiaMetabolic acidosis markersMutations in HMGCL gene (e.g., Arg41Gln)

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