Target intelligence / Profile preview

Acyl-protein thioesterase 1 (APT1)

Target
APT1
Molecular classification
Enzyme, Hydrolase (alpha/beta hydrolase superfamily)
01

Overview

Acyl-protein thioesterase 1 (APT1, encoded by LYPLA1) is an enzyme of the alpha/beta hydrolase superfamily that exhibits both depalmitoylating and lysophospholipase activities[1]. It catalyzes the removal of palmitate and other fatty acyl groups from S-acylated cysteine residues on substrate proteins—a reversible posttranslational modification called S-palmitoylation[1][4]. By regulating this cycle, APT1 controls protein membrane association, trafficking, and downstream signaling, affecting pathways such as Ras localization, G protein signaling, and autophagy[1][2][4]. In neurons, APT1 has a role in dendritic spine morphogenesis and synaptic function[4]. Dysregulation of LYPLA1/APT1 is implicated in diseases including cancer, neurodegeneration, and metabolic disorders, and its inhibition has been shown to impact apoptosis (e.g., in leukemia cells) and reduce proliferation and migration in certain cancer types[5][7]. Research inhibitors of APT1 are under development and represent potential therapeutic strategies; however, broad effects on protein palmitoylation underscore the need for careful assessment of safety and specificity[7][2][4].

Other names
LYPLA1Lysophospholipase 1Palmitoyl-protein hydrolaseAcyl-protein thioesterase 1APT1LPL1hAPT1LPL-ILysoPLA ILysophospholipase ILysophospholipid-specific lysophospholipase
02

Mechanism of action

Enzyme inhibitors of APT1 increase global protein palmitoylation by inhibiting depalmitoylation[7]. APT1 targeting drugs/interventions can modulate apoptosis by affecting palmitoylation status of death receptors and signaling proteins[7].

03

Biological functions

Depalmitoylation (removal of palmitate groups from proteins)Lysophospholipase activity (hydrolysis of lysophospholipids)Regulation of protein palmitoylation cycleProtein localization and trafficking controlModulation of cell signaling (e.g., Ras, G proteins)Regulation of autophagyCell proliferation and migrationModulation of apoptosis signaling (specifically death receptor signaling)
04

Disease associations

Cancer (including non-small cell lung cancer and chronic lymphocytic leukemia)Neurodegenerative diseases (e.g., neuronal ceroid lipofuscinosis, potential links to Alzheimer’s disease and vascular dementia)Other (lipid metabolism disorders, cell migration/invasion related diseases)
05

Safety considerations

Potential off-target effects due to broad impact on multiple palmitoylated proteins and lipid metabolismInterference in essential cell signaling pathways, possibly leading to unanticipated toxicity, particularly in nervous system and cancer contexts[2][7].
06

Interacting drugs

No widely approved drugs are specifically listed as interacting with APT1/LYPLA1, but research inhibitors have been developed and used experimentally[7].
07

Biomarkers

LYPLA1 expression (at mRNA/protein level), notably in some cancers such as chronic lymphocytic leukemia[7].

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