Target intelligence / Profile preview

Alternative Lengthening of Telomeres pathway (ALT)

Target
ALT
Molecular classification
Biological pathway, DNA repair mechanism, Homologous recombination pathway
01

Overview

The Alternative Lengthening of Telomeres (ALT) pathway is a telomerase-independent mechanism used by approximately 10-15% of human cancers to maintain telomere length and achieve cellular immortality (Dilley and Greenberg, 2015, Nat Struct Mol Biol). Unlike most cancers that upregulate telomerase, ALT-positive cells utilize a homology-directed repair (HDR) process to copy telomeric DNA from other telomeres or extrachromosomal DNA templates (Sobinoff and Pickett, 2017, JMB). This pathway is frequently associated with mutations in the chromatin remodeling proteins ATRX or DAXX and is characterized by high levels of telomeric replication stress and genomic instability (Heaphy et al., 2011, Science). Because ALT-positive cells are uniquely dependent on specific DNA damage response (DDR) proteins, such as ATR kinase, to manage this stress, these proteins have emerged as promising therapeutic targets (Flynn et al., 2015, Science). Current clinical strategies focus on using ATR inhibitors or PARP inhibitors to selectively induce synthetic lethality in ALT-positive tumors, which include specific subtypes of osteosarcoma, glioblastoma, and soft tissue sarcomas (Kim et al., 2019, JCI). Monitoring for ALT activity typically involves detecting C-circles or ALT-associated PML bodies (APBs) in patient samples to guide therapy (Henson et al., 2009, Nat Biotechnol).

Other names
ALT mechanismTelomerase-independent telomere maintenanceHomologous recombination-mediated telomere lengtheningALT telomere maintenance
02

Mechanism of action

Inhibition of the DNA damage response (DDR) proteins, particularly ATR kinase, which ALT-positive cells rely on to manage high levels of replication stress and telomeric DNA damage (Flynn et al., 2015, Science). Other strategies include G-quadruplex stabilization to induce telomeric instability or PARP inhibition to disrupt recombination-mediated repair and induce synthetic lethality (Kim et al., 2019, JCI).

03

Biological functions

Telomere maintenanceDNA recombinationGenome stabilityCellular immortality
04

Disease associations

CancerOsteosarcomaGlioblastoma multiformeSoft tissue sarcomaPancreatic neuroendocrine tumorAstrocytoma
05

Safety considerations

Hematologic toxicity (anemia, neutropenia) from systemic ATR inhibitionPotential for compensatory activation of telomerase as a resistance mechanismOff-target effects on healthy cells with high baseline replication stressGastrointestinal toxicity associated with DDR inhibitors
06

Interacting drugs

Berzosertib (M6620)

5 more in the full profile.

07

Biomarkers

C-circles (extrachromosomal circular telomeric DNA)ALT-associated PML bodies (APBs)ATRX mutationDAXX mutationTelomere length heterogeneityTelomere sister chromatid exchange (T-SCE)

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