Target intelligence / Profile preview

AT-rich interactive domain-containing protein 1B (ARID1B)

Target
ARID1B
Molecular classification
Transcription factor, Chromatin remodeling complex subunit, DNA-binding protein, SWI/SNF complex component
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Overview

AT-rich interactive domain-containing protein 1B (ARID1B) is a critical non-catalytic subunit of the SWI/SNF (BAF) chromatin-remodeling complex, which utilizes energy from ATP hydrolysis to reposition nucleosomes and modulate DNA accessibility. It plays a fundamental role in regulating gene expression programs essential for cell cycle progression, cellular differentiation, and particularly neurodevelopment (UniProt Q8NFD5). Germline mutations or deletions in ARID1B are the most frequent cause of Coffin-Siris syndrome, a condition characterized by intellectual disability and distinct physical features (Santen et al., 2012, PMID: 22426309). In the context of oncology, ARID1B has gained prominence as a major therapeutic vulnerability due to its synthetic lethal relationship with its paralog, ARID1A. In cancers where ARID1A is lost—a common occurrence in gynecological and gastrointestinal malignancies—tumor cells become absolutely dependent on ARID1B to maintain the functional integrity of the BAF complex (Helming et al., 2014, PMID: 25501368). Consequently, the development of ARID1B degraders, such as PROTACs, represents a promising precision medicine strategy to selectively target ARID1A-mutant tumors while minimizing impact on healthy cells.

Other names
BAF250B6q25.3DAN15ELD/OSA1OSA2P250RBRG1-associated factor 250b
02

Mechanism of action

Synthetic lethality (targeting ARID1B in ARID1A-deficient cells to disrupt BAF complex function)

03

Biological functions

Chromatin remodelingGene expression regulationCell cycle regulationNeurodevelopmentCell differentiation
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Disease associations

Coffin-Siris syndromeIntellectual disabilityAutism spectrum disorderOvarian clear cell carcinomaEndometrial carcinomaNeuroblastomaHepatocellular carcinoma
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Safety considerations

Haploinsufficiency-driven developmental toxicityPotential for broad epigenetic dysregulation in normal tissuesRisk of neurodevelopmental impairment
06

Interacting drugs

ARID1B-targeting PROTACs (Experimental)

1 more in the full profile.

07

Biomarkers

ARID1A loss-of-function mutationARID1B protein expression levels6q25.3 chromosomal deletion

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