Target intelligence / Profile preview

Bacterial biofilm matrix and cellular components (EPS)

Target
EPS
Molecular classification
Extracellular matrix, Polysaccharide, Protein, Nucleic acid, Lipid
01

Overview

Bacterial biofilm matrix and cellular components refer to the complex, self-produced extracellular polymeric substances (EPS) and the embedded bacterial cells that characterize biofilm growth. The matrix is primarily composed of exopolysaccharides, proteins, extracellular DNA (eDNA), and lipids, which provide structural stability and a protective barrier against environmental stressors, host immune responses, and antimicrobial agents (PMID: 20844530). Biofilms are central to the pathogenesis of numerous chronic and healthcare-associated infections, including those involving medical implants, cystic fibrosis lungs, and chronic wounds (PMID: 10334980). Therapeutic strategies targeting the biofilm matrix aim to degrade its structural components or inhibit their synthesis, thereby weakening the biofilm and restoring the efficacy of conventional antibiotics (PMID: 28362156). Examples of such interventions include the use of enzymes like DNase I to target eDNA or glycoside hydrolases to break down polysaccharides (PMID: 27510863).

Other names
Extracellular polymeric substancesBiofilm matrixBacterial biofilmExtracellular matrix (bacterial)Biofilm-associated proteinsExtracellular DNA (eDNA)
02

Mechanism of action

The primary mechanisms include the enzymatic degradation of extracellular polymeric substances (EPS) such as eDNA and polysaccharides, inhibition of the initial attachment of bacterial cells, and the disruption of quorum sensing pathways to prevent biofilm maturation (PMID: 28362156). These actions increase the permeability of the biofilm, allowing conventional antibiotics and host immune cells to reach and eliminate the embedded bacteria (PMID: 27510863).

03

Biological functions

Structural integrityProtectionAdhesionNutrient trappingHorizontal gene transferQuorum sensing
04

Disease associations

InfectionChronic infectionCystic fibrosisMedical device-associated infectionPeriodontitisEndocarditisChronic wound infection
05

Safety considerations

Risk of bacteremia or sepsis upon biofilm disruptionPotential for inflammatory response to released componentsLimited efficacy as monotherapyPotential for off-target enzymatic activity
06

Interacting drugs

Dornase alfa

7 more in the full profile.

07

Biomarkers

Extracellular DNA levelsAlginatePel polysaccharidePsl polysaccharideBiofilm-specific antibodies

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