Target intelligence / Profile preview

Beta-keto-L-gulonate decarboxylase (BKGD)

Target
BKGD
Molecular classification
Enzyme (specifically, decarboxylase and ester hydrolase), Metallo-β-lactamase fold protein (structural superfamily), DUF1907 domain-containing protein
01

Overview

Beta-keto-L-gulonate decarboxylase (BKGD), also known as ester hydrolase C11orf54, is a highly conserved enzyme present in humans and other metazoans. It catalyzes the decarboxylation of β-keto-L-gulonate to L-xylulose, thus completing the pentose pathway and explaining the molecular origin of L-xylulose in human metabolism. This alternative route for pentose sugar conversion is evolutionarily ancient and offers a metabolic tradeoff relevant to ascorbate (vitamin C) biosynthesis. Structurally, BKGD features a zinc-coordinating motif and belongs to the metallo-β-lactamase fold protein superfamily. It also has weak in vitro ester hydrolase activity but is now primarily defined as a decarboxylase by recent studies. Beyond its metabolic role, BKGD/C11orf54 regulates cell proliferation, DNA damage response, and repair in mammalian cells, making it a biomarker for several cancers. The protein is cytoplasmic, with enrichment in kidney and liver, and interacts with various signaling and structural proteins relevant to cellular homeostasis. While direct pharmacological targeting is not yet established, modulation of its pathway (such as autophagy inhibitors) reveals therapeutic potential and safety concerns tied to genotoxic stress.

Other names
Ester hydrolase C11orf54C11orf54PTD012PTOD012LP4947MEEPEpididymis secretory sperm binding protein
02

Mechanism of action

Bafilomycin A1 rescues C11orf54 knockdown-induced DNA damage by inhibiting chaperone-mediated autophagy, suggesting a functional, indirect mechanism via CMA inhibition

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Biological functions

Decarboxylation of β-keto-L-gulonate to L-xylulose (key step in pentose pathway)Hydrolysis of ester bonds (in vitro activity on p-nitrophenyl acetate)DNA damage response and regulation of DNA repair (influences cell proliferation, apoptosis, and homologous recombination)Zinc ion binding (catalytic activity)
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Disease associations

Biomarker for renal cancer and endometrial cancerAssociated with DNA repair responses relevant to cancer development and response to chemotherapy (cisplatin sensitivity)Possible relevance in pentosuria (defective pentose metabolism)Possible roles in cell proliferation and apoptosis
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Safety considerations

Knockdown/deficiency can increase DNA damage and apoptosis, activating ATM-dependent DNA damage response; implications for genotoxicity and drug sensitivityUnknown off-target effects due to poorly understood systemic functionsNo established clinical safety profile for direct targeting
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Interacting drugs

Bafilomycin A1
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Biomarkers

γH2A.X (p-H2A.X-Ser139) levels as markers of DNA damage in C11orf54 knockdown contextC11orf54 itself is a prospective biomarker for renal cancer and endometrial cancer

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