Target intelligence / Profile preview

Calpain 1 and Calpain 2 (CAPN1 and CAPN2)

Target
CAPN1 and CAPN2
Molecular classification
Enzyme (calcium-dependent cysteine protease), Protease (non-lysosomal), Member of the calpain family (C2 family, MEROPS clan CA), Heterodimer (large catalytic subunit CAPN1 or CAPN2, common small regulatory subunit CAPNS1)
01

Overview

Calpain-1 and Calpain-2 are the two best-studied isoforms of the calpain family, both functioning as calcium-dependent, non-lysosomal cysteine proteases[6][5]. Each is a heterodimer: the 80-kDa large catalytic subunit is encoded by either CAPN1 (calpain-1/μ-calpain) or CAPN2 (calpain-2/m-calpain), and both share a common 28-kDa small regulatory subunit (CAPNS1). They act primarily as limited proteases, cleaving many intracellular substrates to modify their activity, and thereby regulate cell signaling, adhesion, migration, synaptic plasticity, apoptosis, and proliferation[5][3][6][1]. Calpain-1 tends to support neuroprotective signaling and plasticity, while calpain-2 can promote neurodegeneration under excitotoxic conditions[3]. Both isoforms have distinct activation thresholds for calcium, structural features, and substrate profiles. Their abnormal activation or inhibition has critical roles in cancer, neurodegenerative disease, inflammation, and pathology related to cell migration and death, making them attractive but challenging targets for drug development[4][5][3][6].

Other names
μ-calpain (Calpain-1)m-calpain (Calpain-2)CANP1 (Calpain-1)CANP2 (Calpain-2)CAPN1 and CAPN2 (gene/protein names)Large subunit (80 kDa, CAPN1 or CAPN2)Small regulatory subunit CAPNS1 (shared by both isoforms)
02

Mechanism of action

Active site inhibition (experimental compounds); Allosteric inhibition (targeting heterodimerization of catalytic/regulatory subunits); Modulation of calcium-binding and enzyme activation

03

Biological functions

Limited proteolysis of cellular substrates (regulatory, not degradative)Regulation of cell signaling pathwaysModulation of synaptic plasticity and memory (particularly Calpain-1)Control of cell adhesion, migration, and cytoskeletal remodelingMediation of apoptosis and cell deathRegulation of cell proliferation and transcriptionLong-term potentiation (LTP; Calpain-1)
04

Disease associations

Cancer (progression, metastasis, and therapy resistance)Neurodegenerative diseases (distinct roles in synaptic plasticity and excitotoxicity)InflammationCardiovascular diseasesPotential roles in muscular dystrophies and infection
05

Safety considerations

Off-target effects due to widespread expression and similarity to other cysteine proteasesPotential for disrupting essential cellular functions (adhesion, migration, apoptosis, synaptic function)Need for isoform-selective inhibition to avoid unwanted toxicityModulation of calpain activity may inadvertently affect cell viability and plasticity in the nervous system
06

Interacting drugs

Calpeptin

4 more in the full profile.

07

Biomarkers

CAPN1 and CAPN2 gene/protein expression (tissue, tumor, nervous system)Calpain activity assays (biochemical)Cleavage products of specific substrates (e.g., spectrin breakdown products)CAPNS1 levels (subunit shared by both isoforms; may indicate overall calpain activity)

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