Target intelligence / Profile preview

Histone deacetylase class I/IV (HDAC class I/IV)

Target
HDAC class I/IV
Molecular classification
Enzyme, Histone modification, Epigenetic regulator
01

Overview

Histone deacetylases are enzymes that remove acetyl groups from lysine residues on the N-terminal tails of core histones as well as from non-histone proteins. This action leads to chromatin condensation and transcriptional repression by increasing the positive charge on histones, thereby strengthening their interaction with DNA. The human genome encodes several classes of HDACs: Class I includes HDAC1, 2, 3, and 8—primarily nuclear enzymes involved in regulating gene expression through chromatin remodeling. Class IV consists solely of HDAC11. Both classes play critical roles in cellular processes such as cell cycle progression, apoptosis regulation, differentiation, inflammation modulation via transcription factors like MEF2 or HIF pathways (notably for some members), and metabolic homeostasis. Aberrant activity or expression has been implicated in cancer development/progression as well as other diseases such as neurodegeneration and inflammatory disorders. Several small-molecule inhibitors targeting these enzymes have been developed for therapeutic use—especially in oncology—by promoting hyperacetylation that reactivates silenced genes involved in growth inhibition or apoptosis.[1][4][5][6]

Other names
HDACsHistone deacetylasesClass I histone deacetylasesClass IV histone deacetylase (HDAC11)
02

Mechanism of action

Inhibition of histone deacetylation leading to increased acetylation of histones and non-histone proteins, resulting in altered gene expression and induction of cell cycle arrest or apoptosis in cancer cells[1][4].

03

Biological functions

Regulation of gene expressionChromatin remodelingCell cycle controlApoptosisCellular differentiation
04

Disease associations

CancerNeurodegenerative diseaseInflammationMetabolic disease
05

Safety considerations

Hematologic toxicity (e.g., thrombocytopenia)Cardiac toxicity (QT prolongation)Gastrointestinal side effects (nausea, vomiting)Fatigue
06

Interacting drugs

Vorinostat (SAHA)

2 more in the full profile.

07

Biomarkers

No widely accepted biomarkers specific for patient selection for all class I/IV HDAC inhibitors; some studies use acetylated histones as pharmacodynamic markers.

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