Target intelligence / Profile preview

Decaprenylphosphoryl-β-D-ribose 2′-epimerase (DprE1)

Target
DprE1
Molecular classification
Enzyme, Flavoenzyme, Oxidoreductase
01

Overview

Decaprenylphosphoryl-β-D-ribose 2′-epimerase (DprE1) is a highly conserved flavoenzyme in mycobacteria, essential for the biosynthesis of key cell wall components such as arabinogalactan and lipoarabinomannan[1][2][4]. DprE1 catalyzes the FAD-dependent oxidation of decaprenylphosphoryl-D-ribose to decaprenylphosphoryl-2-ketoribose, with the latter subsequently reduced by DprE2 to form decaprenylphosphoryl arabinose, a substrate for cell wall construction[3][4]. Structural studies reveal DprE1 is membrane-associated and undergoes conformational changes upon ligand binding[1]. With its critical role, DprE1 is intensively targeted for tuberculosis drug discovery, and numerous small molecule inhibitors have been developed—some in clinical evaluation[2][4]. The enzyme’s druggability, potential for resistance, and central role in cell survival make it a focal point for novel therapeutics.

Other names
Mycobacterial cell wall synthesis enzyme DprE1Decaprenylphosphoryl-β-D-ribose epimerase 1DprE1 flavoenzyme
02

Mechanism of action

Covalent inhibition of the active site (by some inhibitors such as benzothiazinones) - Noncovalent active site blockade (by other scaffolds, e.g., hydantoin derivatives, quinoxalines) - Inhibition of cell wall biosynthesis, leading to mycobacterial cell death

03

Biological functions

Cell wall biosynthesisArabinogalactan/lipoarabinomannan synthesis (structural polysaccharides of mycobacterial cell wall)Membrane complex formation (with DprE2)Essential step converting decaprenylphosphoryl-d-ribose to decaprenylphosphoryl-2-ketoribose
04

Disease associations

Infection (especially tuberculosis; target in Mycobacterium tuberculosis)Other (potentially nontuberculous mycobacteria due to conserved sequence)
05

Safety considerations

Potential for rapid resistance via target mutationOff-target toxicity risks (less frequent, mainly predicted from ADMET studies)Challenge of permeability and drug delivery to the mycobacterial cell wall
06

Interacting drugs

Benzothiazinones (BTZ043, PBTZ169)

3 more in the full profile.

07

Biomarkers

DprE1 mutations for resistance (may help in patient stratification or monitoring efficacy for drugs)Presence/absence of mycobacterial cell wall components (possible surrogate)

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