Target intelligence / Profile preview

Deoxyribonucleotide pools and DNA integrity

Molecular classification
Metabolic pathway, DNA repair and replication machinery
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Overview

Deoxyribonucleotide pools and DNA integrity refers to the homeostatic regulation of the four deoxyribonucleoside triphosphates (dNTPs) required for DNA synthesis and genome maintenance (Kohnken et al., 2015, PMID: 25913728). The precise balance of these pools is critical for the fidelity of DNA polymerases; imbalances or depletion can lead to increased mutagenesis, replication fork collapse, and double-strand breaks (Pai and Kearsey, 2017, PMID: 28257285). This biological process is a classic target in cancer therapy, where antimetabolites like 5-fluorouracil and hydroxyurea inhibit enzymes such as thymidylate synthase and ribonucleotide reductase to starve cells of DNA precursors (Mathews, 2015, PMID: 25417722). Furthermore, defects in dNTP pool regulation are implicated in mitochondrial DNA depletion syndromes and the aging process (Zhu et al., 2022, PMID: 35105635). Therapeutic strategies often exploit the 'thymineless death' phenomenon or replication stress to selectively eliminate rapidly dividing cells (Wilson et al., 2014, PMID: 24469071).

Other names
dNTP pool maintenanceDeoxyribonucleoside triphosphate metabolismDNA precursor regulationGenome integrity maintenance
02

Mechanism of action

Drugs targeting this process typically inhibit rate-limiting enzymes in dNTP biosynthesis (e.g., ribonucleotide reductase, thymidylate synthase), leading to dNTP pool depletion or imbalance, which induces replication stress, DNA damage, and apoptosis (Kohnken et al., 2015; Wilson et al., 2014).

03

Biological functions

DNA replicationDNA repairNucleotide metabolismGenome stabilityCell cycle regulation
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Disease associations

CancerMitochondrial DNA depletion syndromesViral infectionAutoimmune disorders
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Safety considerations

MyelosuppressionGastrointestinal toxicitySecondary malignanciesTeratogenicityGenotoxicity
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Interacting drugs

Hydroxyurea

6 more in the full profile.

07

Biomarkers

Intracellular dNTP concentrationsγH2AX expressionRibonucleotide reductase subunit levels (RRM1/RRM2)Thymidylate synthase expression

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