Target intelligence / Profile preview

DNA-dependent RNA polymerase from Mycobacterium tuberculosis (RNAP (sometimes abbreviated Rpo))

Target
RNAP (sometimes abbreviated Rpo)
Molecular classification
Enzyme, Multi-subunit polymerase, Transcription factor (in context of holoenzyme)
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Overview

Mycobacterial DNA-dependent RNA polymerase is a multi-subunit enzyme essential for bacterial viability. It catalyzes the transcription of DNA into RNA, a process crucial for gene expression and survival of *Mycobacterium tuberculosis*. The enzyme consists of a core complex (subunits α, β, β') often combined with sigma factors for promoter recognition and transcription initiation. Rifampin and related drugs target this enzyme, binding the β subunit (encoded by rpoB), and directly inhibit RNA synthesis, making it a proven and critical therapeutic target for tuberculosis therapy. Mutations in the rpoB subunit are the primary mechanism for the development of resistance to rifampin, contributing to the global challenge of multi-drug-resistant tuberculosis. The enzyme is structurally and functionally distinct from human RNA polymerases, supporting its selective targeting in antimicrobial drug development.

Other names
Mycobacterial RNA polymeraseMtb RNA polymeraseRNAPRpoB (core β subunit)RpoA (core α subunit)RpoC (core β' subunit)
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Mechanism of action

Drugs inhibit RNA synthesis by binding the core enzyme, halting transcription. Prevents elongation or initiation of nascent RNA strand

03

Biological functions

RNA synthesis (transcription of DNA to RNA)Regulation of gene expressionResponse to cellular stressSupport of cell survival and proliferation
04

Disease associations

Infection (Mycobacterium tuberculosis is the etiological agent of tuberculosis)Antibiotic resistance (due to mutation, linked to multi-drug resistance TB)
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Safety considerations

Drug resistance: Mutations in rpoB cause rifampin resistanceHost toxicity: Drugs (like rifampicin) can cause hepatotoxicity, hypersensitivity, and drug interactionsSpecificity: Targeting should avoid human RNA polymerases to reduce off-target effects
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Interacting drugs

Rifampin (Rifampicin)

2 more in the full profile.

07

Biomarkers

Mutations in rpoB gene (especially for rifampicin resistance monitoring)Expression levels of RNA polymerase (research context)

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