Target intelligence / Profile preview

DNA hypomethylation

Molecular classification
Other
01

Overview

DNA hypomethylation denotes a reduction in DNA methylation relative to a baseline, often global across the genome, and refers to a loss of methyl groups at cytosine residues (primarily in CpG dinucleotides)[1][7][8]. This epigenetic alteration is not a specific protein or molecular entity, but a modification state with widespread biological implications. DNA hypomethylation can lead to increased gene expression, chromosomal instability, and is a well-recognized feature in cancer cells, contributing to tumor progression, heterogeneity, and possible reactivation of normally silenced genetic elements[5][7]. It can be induced by genetic, environmental, nutritional, and chemical factors that perturb the function of DNA methyltransferases or related epigenetic machinery[1][2]. Clinically, hypomethylation status is monitored as a biomarker for diagnosis, prognosis, and therapeutic response in oncology, yet DNA hypomethylation itself is not directly targeted by drugs—rather, its upstream modulators (such as DNMTs) are therapeutic targets[1][5].

Other names
Genome-wide DNA hypomethylationGlobal DNA hypomethylationDNA demethylation state
02

Mechanism of action

Inhibition of DNA methyltransferases (DNMTs), leading to reduction of DNA methylation; Modulation of TET activity resulting in active DNA demethylation

03

Biological functions

Regulation of gene expressionChromatin structure modulationGenomic stability maintenanceCell differentiation and development
04

Disease associations

Cancer (initiation, progression, heterogeneity)Aging and age-related diseases
05

Safety considerations

Genomic instabilityReactivation of endogenous retroelementsOff-target gene activationPotential promotion of oncogenesis
06

Interacting drugs

5-aza-2′-deoxycytidine (decitabine)

1 more in the full profile.

07

Biomarkers

LINE-1 methylation (for global methylation status in cancers)Satellite DNA methylationGlobal 5-methylcytosine levels

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