Target intelligence / Profile preview

DNA ligase 3 (DNA ligase III (LIG3))

Target
DNA ligase III (LIG3)
Molecular classification
Enzyme, Nucleotidyl transferase family, DNA repair enzyme, Zinc finger-containing protein (PARP-like ZnF domain)
01

Overview

DNA ligase 3 is a vertebrate-specific enzyme crucial for sealing nicks in DNA during replication and multiple DNA repair pathways, including base excision, nucleotide excision, and single-strand break repair in both nuclear and mitochondrial compartments. Its structure features a unique N-terminal zinc finger that enhances DNA end recognition and binding. In the nucleus, it operates mainly as a complex with XRCC1, and in mitochondria, it is essential for genome maintenance. Ligase 3 becomes particularly important in cells where canonical NHEJ is impaired, facilitating an alternative repair pathway. It is frequently overexpressed in various cancers, where it promotes survival by maintaining DNA repair capacity, making it a promising therapeutic target.

Other names
LIG3DNA ligase IIIDNA ligase IIIα (nuclear and mitochondrial isoforms)Ligase III
02

Mechanism of action

Inhibitors would block the catalytic activity of DNA ligase 3, preventing DNA strand rejoining and leading to accumulation of DNA strand breaks, genomic instability, and cell death, especially in cancer cells dependent on alternative NHEJ. Potential for synthetic lethality when combined with inhibitors of other DNA repair proteins.

03

Biological functions

DNA replicationDNA repair (base excision repair, nucleotide excision repair, single-strand break repair)Alternative non-homologous end joining (alt-NHEJ) for double-strand break repair, especially when canonical NHEJ is compromisedMaintenance of mitochondrial genome integritySignal transduction in DNA damage response
04

Disease associations

Cancer (notably upregulated in some leukemias and other malignancies, supports tumor survival through alternative DNA repair)Neurodegenerative disease (due to genome integrity roles)Potentially in cardiovascular disease and aging by mitochondrial genome maintenance
05

Safety considerations

Therapeutic inhibition of DNA ligase 3 could lead to general genomic instability in non-cancerous tissues, especially those dependent on mitochondrial functionRisks of off-target effects on essential DNA repair in healthy cellsPotential mitochondrial toxicity due to ligase III being the only mitochondrial DNA ligase
06

Interacting drugs

Selective ligase III inhibitors (under investigation for cancer therapy)

2 more in the full profile.

07

Biomarkers

Overexpression of DNA ligase IIIα (proposed as a biomarker for tumors that rely heavily on alternative NHEJ, indicating sensitivity to ligase III inhibition)Co-expression with XRCC1 in nuclear DNA repair complexes

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