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DNA-methyltransferase 1, DNA-methyltransferase 3A, and DNA-methyltransferase 3B (DNMT1, DNMT3A, DNMT3B)

Target
DNMT1, DNMT3A, DNMT3B
Molecular classification
Enzyme, Epigenetic modifier, DNA-modifying enzyme, Transferase (EC 2.1.1.37 for DNMT1/3A/3B), Histone modification-related protein
01

Overview

DNA (cytosine-5)-methyltransferase 1, DNA (cytosine-5)-methyltransferase 3A, and DNA (cytosine-5)-methyltransferase 3B (abbreviated as DNMT1, DNMT3A, and DNMT3B) are enzymes responsible for catalyzing the transfer of a methyl group to the 5-position of cytosine residues in DNA, primarily at CpG sites[3][4][5]. DNMT1 is primarily responsible for maintenance methylation during DNA replication, ensuring faithful propagation of epigenetic signals[3]. DNMT3A and DNMT3B are primarily responsible for de novo methylation during development and in specific contexts, establishing new methylation marks[2][4]. Aberrant activity or expression of these enzymes can contribute to disease, including various cancers, by altering normal gene expression programs[1][2]. Several therapeutic agents seek to inhibit their function or correct pathogenic methylation patterns.

Other names
DNMT1DNMT3ADNMT3BDNA methyltransferase 1/3a/3bMaintenance methyltransferaseDe novo methyltransferase
02

Mechanism of action

Covalent inhibition of DNA methyltransferase activity: Nucleoside analogs (like 5-azacytidine and decitabine) incorporate into DNA/RNA and trap DNMTs covalently, leading to DNA hypomethylation and reactivation of silenced genes[2].

03

Biological functions

Establishing and maintaining DNA methylationEpigenetic gene silencingRegulation of gene expressionX-inactivationGenomic imprintingCell differentiationEmbryonic developmentChromatin structure regulationNeuronal plasticity (especially DNMT1/3A in the brain)
04

Disease associations

CancerDevelopmental disordersNeurodevelopmental and neurodegenerative disordersImmune dysregulationOther epigenetic diseases
05

Safety considerations

Myelosuppression and cytopeniasOff-target hypomethylation and genome instabilityPotential for oncogene activation as well as tumor suppressor gene reactivationDevelopmental toxicity if inhibited in utero
06

Interacting drugs

5-azacytidine (Vidaza)

3 more in the full profile.

07

Biomarkers

Global DNA methylation status (e.g., LINE-1 methylation)Promoter methylation of tumor suppressor genes (e.g., p15, p16)DNMT expression levelsMutational status in cancers and rare syndromes

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