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Drug–peptide–MHC neoantigen complex

Molecular classification
Neoantigen, Major histocompatibility complex (MHC) ligand complex, Immune complex, Other
01

Overview

A **drug–peptide–MHC neoantigen complex** is a molecular entity formed when a **covalent drug or inhibitor** modifies an endogenous peptide (often a tumor antigen), which is subsequently processed and presented on the cell surface by a **major histocompatibility complex (MHC)** molecule[5][4][6]. These complexes function as “neoantigens”—non-self or altered self-peptides that can be specifically recognized by immune effector molecules such as **T cell receptors (TCRs)** or antibodies. The drug moiety, which may result from mutation-targeted covalent inhibition (e.g., of KRAS-G12C or EGFR), alters the peptide’s structure and chemistry, generating a unique surface on the peptide–MHC complex[5][4]. This allows for selective immune targeting, enabling precision immunotherapies such as bispecific T-cell engaging antibodies or engineered TCR therapies that specifically recognize and kill cells presenting the drug–peptide–MHC complex[5][4][6]. This target class is being actively explored in cancer immunotherapy, especially for **personalized tumor vaccines** and adoptive cell therapy strategies[3][6][2]. The selectivity and sensitivity of immune targeting depend critically on the precise structural features of the drug-conjugated peptide–MHC, the HLA genotype, and the unique biology of tumor-specific neoantigens[4][1][2][6]. Potential therapeutic challenges include safety concerns around antigen specificity (to avoid targeting normal tissues), efficient detection and quantification of the rare drug-modified peptide–MHC complexes, and variability in patient MHC genetics and antigen processing pathways[5][6].

Other names
drug–peptide–MHC complexdrug-modified peptide–MHC complexinhibitor–peptide–MHC complexhapten–peptide–MHC complexneoantigen–MHC complexdrug–peptide conjugate–MHC complex
02

Mechanism of action

Immune recognition by T cell receptor (TCR) | Recognition by engineered TCRs or bispecific antibodies | Immune-mediated killing of target cells | Immune checkpoint modulation through altered antigenicity | Other mechanisms involving immune effector engagement

03

Biological functions

Antigen presentationImmune recognitionImmune responseT cell activationTumor immune surveillanceOther
04

Disease associations

CancerInfectionOther
05

Safety considerations

Off-tumor, on-target toxicity if the same peptide–MHC is presented by normal tissuesImmunogenicity leading to autoimmunity or cytokine release syndromeTumor antigen loss or immune escapePotential interference by free drug in circulationDifficulty detecting low-abundance peptide–MHC complexesOther
06

Interacting drugs

Sotorasib

3 more in the full profile.

07

Biomarkers

Presence of drug–peptide–MHC complexes on tumor cell surfaces (detected by specific antibodies or T cells)Expression of mutated or modified peptides (e.g., KRAS-G12C, EGFR mutant peptides)MHC genotype (e.g., HLA-A*03, HLA-A*11)PTM-modified neoantigens (e.g., phosphopeptides, glycopeptides)Other

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