Target intelligence / Profile preview

Dual specificity protein kinase CLK4 (CLK4)

Target
CLK4
Molecular classification
Enzyme (specifically a protein kinase), Dual-specificity kinase, CMGC kinase family (Cyclin-dependent kinases, MAP kinases, Glycogen synthase kinases, CDK-like kinases), LAMMER protein kinase family
01

Overview

Dual specificity protein kinase CLK4 is a serine/threonine and tyrosine kinase belonging to the CDC2-like kinase family, specifically the CMGC kinase group, often called the LAMMER kinases due to a conserved motif[1][3][4]. CLK4 phosphorylates serine- and arginine-rich domain (SR) proteins, influencing spliceosome assembly and alternative pre-mRNA splicing[1][4]. It is implicated in a network of gene expression regulatory mechanisms, and recent studies have highlighted CLK4 as a critical regulator of cardiac hypertrophy by phosphorylating nexilin (NEXN) to maintain healthy sarcomere structure and cardiac function[2]. Genetic deficiency or inhibition of CLK4 can lead to pathological alterations in the heart, including hypertrophy and failure. CLK4 is under investigation as a potential therapeutic target, especially in conditions where alternative splicing or cardiac function is disrupted, although selective, clinically approved drugs for this kinase are not currently available[7].

Other names
CDC like kinase 4CDC-like kinase 4Cdc2-like kinase 4protein serine/threonine kinase Clk4dual specificity protein kinase CLK4LAMMER protein kinaseCLK family member 4
02

Mechanism of action

Inhibition of CLK4 prevents phosphorylation of SR proteins, resulting in modulation of splicing patterns. Small molecule kinase inhibitors bind the ATP-binding pocket of CLK4, disrupting its catalytic activity.

03

Biological functions

Regulation of alternative splicing via phosphorylation of serine/arginine-rich (SR) proteinsPhosphorylation of protein substrates on serine/threonine and tyrosine residuesControl of RNA splicing and spliceosome assemblyRegulation of cardiomyocyte hypertrophy and cardiac functionPotential involvement in cell cycle progression and cell growth
04

Disease associations

Cardiac hypertrophy and heart failure (especially pathological myocardial hypertrophy)Fanconi anemia (associative)Noonan syndrome 1 (associative)Implicated in processes such as oncogenesis, neurodegenerative diseases, inflammatory diseases, and cancer (broader CLK family context)
05

Safety considerations

Off-target effects due to similarity with other CLK kinases and the CMGC familyBroad effects on alternative splicing may lead to unintended gene expression changesCardiac toxicity is possible given its role in heart functionLack of clinical data means safety profile is not well established
06

Interacting drugs

Small molecule inhibitors targeting CLK4 are under investigation

2 more in the full profile.

07

Biomarkers

Phosphorylation status of SR proteins (such as SRSF1, SRSF3)Phosphorylation of NEXN (nexilin) in the cardiac contextExpression levels of cardiac stress markers (Nppa, Nppb, Myh7)No established clinical biomarkers specifically for patient selection with CLK4 inhibitors

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