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Expanded CUG repeat RNA in Dystrophia Myotonica Protein Kinase mRNA (CUGexp RNA)

Target
CUGexp RNA
Molecular classification
RNA, Messenger RNA (mRNA), Non-coding repeat expansion, Toxic gain-of-function RNA
01

Overview

Expanded CUG repeat RNA in Dystrophia Myotonica Protein Kinase (DMPK) mRNA is the primary pathogenic driver of Myotonic Dystrophy Type 1 (DM1), a multisystemic neuromuscular disorder [1, 19]. This toxic gain-of-function RNA arises from an unstable CTG trinucleotide expansion in the 3' untranslated region (UTR) of the DMPK gene [11, 20]. When transcribed, these expanded repeats (CUGexp) fold into stable, branched hairpin structures that aggregate into discrete nuclear ribonuclear foci [1, 11]. These foci sequester essential RNA-binding proteins, most notably the Muscleblind-like (MBNL) family of splicing regulators, leading to a widespread failure of alternative splicing known as 'splicopathy' [8, 13, 23]. The resulting molecular dysfunction causes the hallmark symptoms of DM1, including myotonia, progressive muscle wasting, and cardiac conduction defects [15, 21]. Therapeutic development focuses on reducing the levels of this toxic RNA or neutralizing its effects. Current strategies include antisense oligonucleotides (ASOs) and siRNAs designed to trigger the degradation of the mutant transcript, as well as small molecules and artificial RNA cleavers (ARCs) intended to disrupt the sequestration of MBNL proteins and restore normal cellular splicing patterns [2, 3, 15, 21].

Other names
Toxic CUG repeat RNAMutant DMPK transcriptCUGexpDMPK 3' UTR expansionPathogenic CUG repeats
02

Mechanism of action

Drugs targeting this molecule primarily act through RNase H-mediated degradation (antisense oligonucleotides), RNA interference (siRNAs), or by using small molecules to competitively bind the CUG repeats and displace sequestered RNA-binding proteins like MBNL1 [2, 3, 5, 21].

03

Biological functions

Sequestration of RNA-binding proteinsInterference with alternative splicingInduction of nuclear ribonuclear fociActivation of double-stranded RNA-dependent protein kinase (PKR)Induction of cellular senescenceRepeat-associated non-AUG (RAN) translation
04

Disease associations

Myotonic dystrophy type 1 (DM1)Fuchs' endothelial corneal dystrophy (FECD)
05

Safety considerations

Off-target degradation of wild-type DMPK mRNANon-specific binding to other CUG-containing transcriptsChallenges in systemic delivery to skeletal muscle, heart, and CNSPotential immunogenicity of delivery vehicles such as antibody-oligonucleotide conjugates (AOCs)Toxicity associated with high-dose oligonucleotide therapies
06

Interacting drugs

Del-desiran (AOC-1001)

8 more in the full profile.

07

Biomarkers

MBNL1 sequestration and nuclear localizationAlternative splicing of CLCN1 (Chloride Voltage-Gated Channel 1)Alternative splicing of BIN1 (Bridging Integrator 1)Alternative splicing of INSR (Insulin Receptor)DMPK mRNA levelsNuclear ribonuclear foci countCirculating microRNAs (e.g., miR-1, miR-133a, miR-206)

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