Target intelligence / Profile preview

F-box only protein 6 (FBXO6)

Target
FBXO6
Molecular classification
Enzyme (component of E3 ubiquitin ligase complex), Substrate recognition subunit of SCF (SKP1-CUL1-F-box) E3 ubiquitin ligase, F-box protein family member (specifically FBXO subclass), Carbohydrate-binding protein (recognizes glycoproteins via FBA domain), Other: Protein involved in endoplasmic reticulum-associated degradation (ERAD)
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Overview

F-box only protein 6 (FBXO6) is a member of the F-box protein family, distinguished by an approximately 40-amino-acid F-box motif. Within the cell, FBXO6 acts as a substrate recognition unit for the SCF (SKP1-cullin-F-box) E3 ubiquitin ligase complex, targeting glycoproteins—including misfolded or unfolded proteins—and specific phosphorylated substrates for ubiquitination and subsequent proteasomal degradation. This protein is involved in protein quality control via the ER-associated degradation pathway, cell cycle regulation by degrading DNA damage checkpoint proteins such as CHEK1, and is implicated in mitotic control via interactions with spindle checkpoint proteins Mad2 and BubR1. FBXO6 has a notable role in ovarian cancer, where its overexpression correlates with poor prognosis, and its activity is linked to modulation of tumor suppressors such as RNASET2. The protein is widely expressed across tissues, and while drug discovery efforts are ongoing, no clinical drugs directly target FBXO6 to date. Dysfunction in FBXO6 is associated with cancer and glycosylation disorders, reflecting its critical regulatory functions in cell cycle progression and protein homeostasis.

Other names
F-box only protein 6FBXO6FBG2FBS2FBX6Fbx6bF-box/G-domain protein 2F-box protein FBG2F-box protein Fbx6F-box protein that recognizes sugar chains 2
02

Mechanism of action

Inhibition: Would block ubiquitination of glycoprotein substrates or downstream tumor suppressors (e.g., RNASET2, CHEK1), potentially reactivating their tumor-suppressive functions. Activation: Would enhance degradation of misfolded glycoproteins or checkpoint proteins, possibly used to clear toxic protein aggregates or regulate cell cycle checkpoints.

03

Biological functions

Ubiquitination and degradation of glycoproteins (retrotranslocated from ER)Recognition of unfolded or misfolded glycoproteins and sulfated glycansCell cycle control (targets DNA damage checkpoint proteins, such as CHEK1, for degradation)Regulation of mitosis and chromosome separation (interacts with spindle checkpoint proteins Mad2, BubR1)Regulation of endoplasmic reticulum-induced apoptosis and stress responseImmune response (Class I MHC antigen processing and presentation pathway)Protein quality control (ERAD)
04

Disease associations

Cancer (associated with ovarian cancer, lung cancer, role in chemotherapy resistance and cell proliferation/migration/invasion)Congenital disorder of deglycosylationPotential roles in other diseases due to dysfunction in protein degradation pathway (e.g., neurodegeneration, infection, cardiovascular disease are possible, but not strongly associated)
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Safety considerations

Ubiquitin-proteasome system inhibitors may have broad effects, as FBXO6 is expressed in many tissuesSpecific inhibition could interfere with normal protein quality control (ERAD), raising potential toxicityCell cycle and apoptosis regulation mean off-target effects could impact proliferative tissues
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Interacting drugs

None currently approved or in clinical trials explicitly targeting FBXO6 were identified in the results; FBXO6 may be indirectly modulated by drugs impacting the ubiquitin-proteasome system, but no specific direct inhibitors/activators are known
07

Biomarkers

FBXO6 overexpression (associated with poor prognosis in ovarian cancer)FBXO6 levels may correlate with ER stress markers, and cell cycle checkpoint activity (CHEK1 phosphorylation status)No FDA-approved diagnostic biomarker, but used in research tissue panels

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