Target intelligence / Profile preview

Faecalibacterium prausnitzii (F. prausnitzii)

Target
F. prausnitzii
Molecular classification
Other
01

Overview

Faecalibacterium prausnitzii is a Gram-positive, strictly anaerobic commensal bacterium and a keystone species of the human gut microbiome, typically accounting for 5-10% of the total fecal microbiota in healthy individuals. It is primarily recognized for its role as a major producer of butyrate, a short-chain fatty acid that serves as the essential energy source for colonocytes and is critical for maintaining the integrity of the intestinal epithelial barrier. Beyond its metabolic contributions, F. prausnitzii exerts potent anti-inflammatory effects by secreting the Microbial Anti-inflammatory Molecule (MAM) protein, which inhibits the NF-kappaB signaling pathway and induces the production of regulatory T cells (Tregs). Clinically, a significant reduction in the abundance of this bacterium is a consistent hallmark of dysbiosis in patients with inflammatory bowel disease (IBD), particularly Crohn's disease, as well as metabolic disorders like type 2 diabetes and obesity. Therapeutic strategies targeting F. prausnitzii focus on its restoration through live biotherapeutic products (LBPs), such as the investigational strain EXL01, or through the administration of prebiotics like inulin and metformin to stimulate its endogenous growth.

Other names
Fusobacterium prausnitziiBacteroides prausnitziiClostridium cluster IVBacillus mucosus anaerobius
02

Mechanism of action

Restoration of gut homeostasis through the production of butyrate which inhibits histone deacetylases (HDACs) and the secretion of anti-inflammatory peptides that suppress pro-inflammatory cytokine production.

03

Biological functions

Butyrate productionAnti-inflammatory signalingGut barrier maintenanceImmune modulationRegulatory T cell inductionNF-kappaB pathway inhibition
04

Disease associations

Inflammatory bowel diseaseCrohn's diseaseUlcerative colitisType 2 diabetesObesityColorectal cancerIrritable bowel syndromeChronic fatigue syndromeLiver cirrhosis
05

Safety considerations

Extreme oxygen sensitivity (manufacturing and delivery challenges)Strain-dependent antibiotic resistanceRisk of translocation in immunocompromised statesLimited long-term safety data for live biotherapeutic administration
06

Interacting drugs

Metformin

5 more in the full profile.

07

Biomarkers

Fecal abundance of Faecalibacterium prausnitziiFecal butyrate concentrationMicrobial Anti-inflammatory Molecule (MAM) levels

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