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FERM and PDZ domain containing 2B (FRMPD2B)

Target
FRMPD2B
Molecular classification
Other (truncated scaffold protein, gene duplication product), originally classified as a pseudogene, now considered a member of the scaffold protein family due to retained PDZ domains
01

Overview

FERM and PDZ domain containing 2B (FRMPD2B) is a truncated human-specific paralog of FERM and PDZ domain containing 2 (FRMPD2), emerging through a partial duplication event ~2.3 million years ago on chromosome 10q. Although annotated as a pseudogene in many databases, new evidence reveals that FRMPD2B produces a 320-amino-acid protein retaining key PDZ domains that mediate interactions with postsynaptic receptors, notably NMDA receptor subunits. FRMPD2B is expressed postnatally in the human brain and functions as a dominant negative modulator of full-length FRMPD2, affecting synaptic transmission, synaptic plasticity, and susceptibility to induced seizures. Variants affecting this locus, such as deletions or duplications, are associated with intellectual disability, autism, and epilepsy, suggesting a previously unappreciated role in human-specific neurodevelopment and disease. Key points: - FRMPD2B is not a classic receptor, enzyme, or transporter but rather a protein product of a human-specific gene duplication event, functioning in postsynaptic signaling in the brain by antagonizing the full-length FRMPD2 scaffold protein. - It is generally not considered a direct or druggable target, but new functional evidence may warrant re-evaluation of its classification and disease relevance.

Other names
FRMPD2BFRMPD2FRMPD2L1FRMPD2L2FRMPD2P1FRMPD2P2FRMPDP2PDZD5APDZD5BPDZD5CPDZK4PDZK5APDZK5BPDZK5CbA556L1.2yX59F3.2FERM and PDZ domain containing 2 like 1FERM and PDZ domain containing 2 like 2FERM and PDZ domain containing 2 pseudogene 1FERM and PDZ domain containing 2 pseudogene 2FERM and PDZ domain-containing protein 2FRMPD2 related 1FRMPD2 related 2PDZ domain containing 5APDZ domain containing 5BPDZ domain-containing protein 4PDZ domain-containing protein 5C
02

Mechanism of action

No clinically targeted mechanism; but antagonism (dominant negative effect) of the endogenous full-length FRMPD2, likely through interaction with NMDA receptor subunits (GluN2A)

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Biological functions

Synaptic signaling (modulates synaptic transmission, especially glutamatergic)Cell/axon morphogenesis and growthCell polarizationProtein scaffolding for synapse formation and maintenanceAmplification of induced seizures (disruption increases seizure susceptibility in models)
04

Disease associations

Neurodevelopmental disorders (intellectual disability, autism, epilepsy, chromosome 10q11.21q11.23 deletions affecting both FRMPD2 and FRMPD2B)Potential indirect role in learning and memory via synaptic plasticity alterationsRecurrent copy number variants (deletions/duplications) linked to neurodevelopmental symptoms in children
05

Safety considerations

As not a therapeutic target, no direct datadisruption can increase seizure susceptibility, indicating a potential safety issue if antagonized
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Interacting drugs

Pentylenetetrazol (PTZ, a GABA antagonist, used in seizure models)
07

Biomarkers

Chromosome 10q11.21q11.23 deletion/duplication affecting FRMPD2B and FRMPD2 could serve as a biomarker for select neurodevelopmental disorders

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