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Fibrosis-related gene expression pathways

Molecular classification
Other
01

Overview

"Fibrosis-related gene expression pathways" refers to the constellation of cellular signaling, transcriptional, and post-transcriptional mechanisms that regulate fibrogenesis—the pathological accumulation of extracellular matrix components such as collagen, fibronectin, and various glycoproteins leading to tissue scarring. Key pathways and molecules include: - TGF-β signaling: a central mediator that drives fibroblast activation and collagen synthesis. - PDGF signaling: vital for fibroblast proliferation and migration. - MAPK, PI3K-Akt, and ER stress/UPR: involved in cell survival, inflammation, and apoptosis in fibrotic microenvironments. - Integrin and protease-activated receptor signaling: modulate cell-matrix and cell-cell interactions, influencing inflammation and matrix remodeling. - Genes commonly upregulated in fibrosis: COL1A1, COL3A1, COL1A2 (collagens); SPP1 (Osteopontin); CTGF (Connective tissue growth factor); EFEMP2, FBLN5 (fibulin family); THBS2 (thrombospondin-2)[2][3][4]. These signaling networks are not unique to a particular organ but are found in lung, liver, heart, kidney, and other tissues undergoing pathological fibrosis. Rather than being a standard "therapeutic target," this term covers many possible targets; drug development focuses on inhibiting or modulating one or more of these molecular components[2][3][4][5][6]. **Key insights:** - "Fibrosis-related gene expression pathways" does *not* correspond to a single druggable target but an umbrella for numerous targets already under investigation. - Canonical targets within these pathways include TGF-β receptors, PDGF receptors, integrins, and key matrix regulators, each with their own gene/protein names and disease relevance. - As a label for structured target data, this entry is *incorrect*—it is too broad and should be broken down into the specific molecular targets within the pathway for accurate drug, biomarker, and mechanism mapping.

Other names
Fibrotic gene expression networksFibrosis-associated pathwaysFibrotic signaling pathwaysFibrosis transcriptomic signatures
02

Biological functions

Extracellular matrix organizationCell adhesionSignal transductionInflammationCell proliferationTissue repair
03

Disease associations

Fibrotic disease (including pulmonary fibrosis, liver fibrosis, kidney fibrosis, cardiac fibrosis, others)Other (including chronic inflammatory disease and tissue remodeling)
04

Biomarkers

Collagen family gene/protein expression (e.g., COL1A1, COL3A1, COL1A2)CTGF (Connective tissue growth factor)SPP1 (Osteopontin)EFEMP2 (Fibulin-4), FBLN5 (Fibulin-5)PDGF and its receptorsActivation status of pathways (e.g., TGF-β signaling, PI3K-Akt, ER stress pathway)

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