Target intelligence / Profile preview

G-quadruplex nucleic acid structure (G4)

Target
G4
Molecular classification
Other (non-coding nucleic acid secondary structure)
01

Overview

G-quadruplexes are four-stranded nucleic acid secondary structures that form in guanine-rich DNA or RNA sequences via stacks of G-tetrads held together by Hoogsteen hydrogen bonds and stabilized by monovalent cations. They are prevalent in telomeres, oncogene promoters (such as c-MYC), and regulatory regions of both DNA and RNA. G-quadruplex stabilization by small molecules (G4 ligands) can modulate gene expression, inhibit telomerase, and interfere with DNA replication or RNA function, making these structures potential targets in cancer and other diseases. However, their widespread distribution poses therapeutic challenges regarding specificity and safety

Other names
G-quadruplexG4G-quartetguanine quadruplexquadruplex DNAquadruplex RNA
02

Mechanism of action

Ligand-mediated stabilization of G-quadruplexes in DNA or RNA leads to: Transcriptional repression of oncogenes (e.g., c-MYC); Disruption of telomerase activity and telomere maintenance; Modulation of RNA function by altering secondary structure and accessibility

03

Biological functions

Regulation of gene transcription (notably oncogene promoters such as c-MYC)Regulation of genome stabilityControl of DNA replicationTelomere maintenanceRegulation of RNA processing, including microRNA biogenesis
04

Disease associations

Cancer (oncogene regulation, genome instability)Neurodegenerative disease (emerging evidence)Other (potential involvement in infection, cardiovascular disease, immune regulation)
05

Safety considerations

Potential off-target effects due to widespread presence of G4 sequences throughout the genome and transcriptomeGenotoxicity from stabilization at unintended genomic sites, possibly leading to genome instability or impaired gene expression in healthy cells
06

Interacting drugs

TMPyP4 (cationic porphyrin, archetypal G4 stabilizer)

2 more in the full profile.

07

Biomarkers

Presence of G-quadruplex-forming sequences (PQS) in tumor genomes (being explored as genomic or transcriptomic biomarkers)Expression levels of G-quadruplex-binding proteins or helicases (such as WRN or FANCJ) for patient stratification/efficacy monitoring (under research)

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