Target intelligence / Profile preview

Genomic and episomal DNA (DNA)

Target
DNA
Molecular classification
Nucleic acid
01

Overview

CNS-expressed genomic and episomal DNA serves as the fundamental substrate for gene-based therapeutics within the central nervous system. Genomic DNA comprises the host's chromosomal material, while episomal DNA refers to non-integrated genetic elements, such as delivered plasmid DNA (pDNA), that exist independently within the nucleus (2). In therapeutic contexts, pDNA is delivered to CNS cells to supplement missing proteins, knock down toxic gene products, or facilitate gene editing of the host genome (3). This target is central to treating a wide array of neurological conditions, including spinal muscular atrophy and Parkinson's disease, by restoring cellular function at the genetic level (4). However, the use of pDNA in the CNS is challenged by the blood-brain barrier, the requirement for sophisticated non-viral delivery systems, and the potential for inflammatory responses to foreign DNA (1). (1) Ramamoorth, M., & Narvekar, A. (2015). Non viral vectors in gene therapy- an overview. J Clin Diagn Res. (2) Hardee, C. L., et al. (2017). Advances in Non-Viral DNA Vectors for Gene Therapy. Genes. (3) NIH/NCBI: Gene therapy for neurological disorders. (4) PubChem: Plasmid DNA.

Other names
Nuclear DNAChromosomal DNAPlasmid DNApDNAExtrachromosomal DNAHost genome
02

Mechanism of action

Exogenous gene expression via episomal transcription or genomic modification to supplement deficient proteins or silence pathogenic genes.

03

Biological functions

Genetic information storageTranscriptionGene expressionDNA replicationDNA repair
04

Disease associations

Neurodegenerative diseaseGenetic disorderCancerLysosomal storage disorderSpinal muscular atrophy
05

Safety considerations

TLR9-mediated innate immune response to bacterial CpG motifs in pDNA (1)NeuroinflammationLow transfection efficiency in post-mitotic neurons (2)Potential for insertional mutagenesis if integration occursBlood-brain barrier (BBB) penetration challenges
06

Interacting drugs

Plasmid DNA (pDNA) vectors

4 more in the full profile.

07

Biomarkers

Transgene mRNA expression levelsTherapeutic protein concentration (e.g., SMN protein)Neurofilament light chain (NfL)Vector copy number (VCN)

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