Target intelligence / Profile preview

Genomic DNA at specified editing loci (gDNA)

Target
gDNA
Molecular classification
Nucleic acid, Genetic material
01

Overview

Genomic DNA at specified editing loci refers to the precise sequences within the human genome targeted for therapeutic modification. Unlike traditional drugs that target proteins, gene editing therapies use programmable nucleases—such as CRISPR-Cas9, Zinc Finger Nucleases (ZFNs), and Transcription Activator-Like Effector Nucleases (TALENs)—to recognize and bind to these specific DNA sites (nih.gov, 2024). Once bound, these tools facilitate permanent changes to the genetic code, such as disrupting a disease-causing gene, correcting a mutation, or inserting a functional sequence (wikipedia.org, 2023). This approach is being utilized to treat a wide range of conditions, including hematological disorders like sickle cell disease, where the BCL11A enhancer is targeted to reactivate fetal hemoglobin (crisprtx.com, 2023). However, the use of genomic DNA as a target presents unique challenges, particularly the risk of off-target editing at unintended sites and the potential for large-scale chromosomal rearrangements, which necessitate rigorous safety assessments using next-generation sequencing (fda.gov, 2023; news-medical.net, 2026).

Other names
Nuclear DNAChromosomal DNATarget DNA sequenceGenomic locusTargeted genomic sequence
02

Mechanism of action

Site-specific genomic modification via programmable nucleases (CRISPR-Cas9, ZFNs, TALENs) or base/prime editors to induce double-strand breaks or single-nucleotide changes, followed by endogenous DNA repair (NHEJ or HDR) to disrupt, correct, or insert genetic sequences (nih.gov, 2024; patsnap.com, 2025).

03

Biological functions

Genetic information storage (wikipedia.org, 2023)Template for transcription (nih.gov, 2024)Regulation of gene expression (patsnap.com, 2025)Inheritance of biological traits (hilarispublisher.com, 2024)
04

Disease associations

Sickle cell disease (crisprtx.com, 2023)Beta thalassemia (nih.gov, 2023)Hereditary transthyretin amyloidosis (crisprmedicinenews.com, 2025)Familial hypercholesterolemia (patsnap.com, 2025)Infectious diseases (e.g., HIV-1) (nih.gov, 2025)Cancer (nih.gov, 2025)
05

Safety considerations

Off-target editing at unintended genomic sites (fda.gov, 2023)Large-scale chromosomal rearrangements and translocations (childrenshospital.org, 2022)On-target unintended deletions (news-medical.net, 2026)Genotoxicity and p53-mediated DNA damage response (news-medical.net, 2026)Immunogenicity of the editing machinery (e.g., Cas9 protein) (nih.gov, 2024)
06

Interacting drugs

Exagamglogene autotemcel (Casgevy)

4 more in the full profile.

07

Biomarkers

Insertion/deletion (indel) frequency (fda.gov, 2023)Targeted DNA sequence variants (SNPs) (broadinstitute.org, 2023)Fetal hemoglobin (HbF) levels (for BCL11A targeting) (crisprtx.com, 2023)Off-target editing frequency (rna-seqblog.com, 2026)Chromosomal integrity (fda.gov, 2026)

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