Target intelligence / Profile preview

GLI family zinc finger 3 (GLI3)

Target
GLI3
Molecular classification
Transcription factor, Zinc finger protein, DNA-binding protein
01

Overview

GLI family zinc finger 3 (GLI3) is a transcription factor in the GLI-Kruppel family characterized by five C2H2-type zinc finger domains that recognize specific DNA motifs to regulate gene transcription[2][3]. GLI3 is a key downstream effector in the Hedgehog (Hh) signaling pathway, switching between transcriptional activator (full-length, GLI3-FL) and repressor (truncated, GLI3-R) forms in response to Hh ligand availability[2]. Mutations in GLI3 cause developmental syndromes such as Greig cephalopolysyndactyly and Pallister-Hall syndrome, reflecting its role in organ patterning, limb formation, and central nervous system development[2]. GLI3 is implicated in several cancers, where it regulates proliferation, angiogenesis, and migration, though it can have tumor-promoting or tumor-suppressing roles depending on the context[2]. Although no drugs directly target GLI3, inhibitors of the Hedgehog pathway (e.g., vismodegib) impact its activity upstream[2]. GLI3 is also essential for the regulation of immune cell development and may have biomarker potential in disease-stratified patient populations[2][1].

Other names
Gli3GLI3-FL (full-length)GLI3-R (repressor)GLI-Kruppel family member 3
02

Mechanism of action

Hedgehog pathway inhibition (prevents activation/processing of GLI3); Promotes degradation or suppresses transcriptional activity of GLI3

03

Biological functions

Regulation of transcriptionCell differentiationTissue developmentSignal transduction (notably within the Hedgehog signaling pathway)Immune cell development
04

Disease associations

Cancer (multiple solid and hematologic malignancies)Genetic diseases (Greig cephalopolysyndactyly syndrome, Pallister-Hall syndrome)Developmental disorders (brain and lung development)Other (role in immune system regulation)
05

Safety considerations

On-target toxicity seen with global Hedgehog pathway inhibition (e.g., effects on bone, hair, and developing tissues)Potential developmental toxicity due to GLI3’s essential role in embryogenesisNon-specific modulation of other GLI proteins leading to off-target effects[2]
06

Interacting drugs

Arsenic trioxide (indirectly inhibits Hedgehog signaling; clinically relevant for some GLI targets)

1 more in the full profile.

07

Biomarkers

GLI3 expression or mutation status (for subtypes of cancer, congenital syndromes)Downstream Hedgehog pathway targets (e.g., GLI1 transcription as a readout of pathway activity)[2]

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