Target intelligence / Profile preview

Gut microbiota and associated plasma metabolites

Molecular classification
Other
01

Overview

The gut microbiota and associated plasma metabolites represent a complex symbiotic ecosystem consisting of trillions of microorganisms and the chemical compounds they produce, which enter the host's systemic circulation (Nicholson et al., 2012, Science). This axis acts as a critical mediator of host physiology, influencing energy homeostasis, immune maturation, and signaling via the gut-brain axis through metabolites like short-chain fatty acids (SCFAs) and indole derivatives (Fan & Pedersen, 2021, Nature Reviews Microbiology). Dysbiosis and the accumulation of harmful metabolites, such as trimethylamine N-oxide (TMAO), are linked to the pathogenesis of cardiovascular disease, type 2 diabetes, and inflammatory bowel disease (Tang et al., 2013, NEJM). While not a single molecular target, this system is modulated by various interventions including probiotics, prebiotics, and drugs like metformin, which alter microbial composition to achieve therapeutic effects (Wu et al., 2017, Nature Medicine). Current research focuses on identifying specific microbial enzymes or metabolites as precise targets for small-molecule drug discovery.

Other names
Gut microbiomeIntestinal microbiotaMicrobiota-metabolite axisHost-microbe metabolome
02

Mechanism of action

Modulation of microbial community structure and alteration of the metabolic output (e.g., increasing short-chain fatty acids or decreasing trimethylamine N-oxide) to restore host-microbe homeostasis.

03

Biological functions

Metabolic regulationImmune system modulationIntestinal barrier maintenanceNeurotransmitter synthesisXenobiotic metabolism
04

Disease associations

Cardiovascular diseaseType 2 diabetesObesityInflammatory bowel diseaseNeurodegenerative disease
05

Safety considerations

Risk of opportunistic infectionsUnintended metabolic shiftsTransfer of antibiotic resistance genesLack of long-term safety data for fecal microbiota transplantHigh inter-individual variability in response
06

Interacting drugs

Metformin

4 more in the full profile.

07

Biomarkers

Short-chain fatty acids (SCFAs)Trimethylamine N-oxide (TMAO)Primary and secondary bile acidsIndole-3-propionic acid16S rRNA microbial profiling

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