Target intelligence / Profile preview

Histone deacetylase 1 (HDAC1), Histone deacetylase 3 (HDAC3), and Histone deacetylase 8 (HDAC8) (HDAC1/3/8)

Target
HDAC1/3/8
Molecular classification
Enzyme, Histone modification, Class I histone deacetylase
01

Overview

Histone deacetylase 1 (HDAC1), Histone deacetylase 3 (HDAC3), and Histone deacetylase 8 (HDAC8) are enzymes belonging to the Class I histone deacetylase family, primarily responsible for removing acetyl groups from lysine residues on histone proteins [1, 2, 3]. This deacetylation process promotes a condensed chromatin state, which generally leads to the transcriptional silencing of genes involved in cell cycle regulation, differentiation, and apoptosis [4]. While HDAC1 and HDAC3 typically function as part of large multi-protein co-repressor complexes like CoREST or NCoR/SMRT, HDAC8 can operate as a monomer and has distinct roles in both nuclear and cytoplasmic signaling [4, 5]. In various cancers, these enzymes are frequently overexpressed, contributing to the epigenetic silencing of tumor suppressor genes and promoting oncogenic transformation [6]. Therapeutic targeting of HDAC1, 3, and 8 with small molecule inhibitors aims to reverse these epigenetic changes, inducing hyperacetylation and restoring the expression of genes that trigger cell cycle arrest and programmed cell death [7]. Drugs such as Vorinostat and Romidepsin are currently utilized in the treatment of cutaneous T-cell lymphoma, while newer, more selective inhibitors are being explored to minimize the systemic toxicities associated with pan-HDAC inhibition [8]. Sources: [1] UniProt Q13547 (HDAC1) [2] UniProt O15379 (HDAC3) [3] UniProt Q9BY41 (HDAC8) [4] Haberland et al., Nature Reviews Genetics, 2009 (PMID: 19238173) [5] West and Johnstone, Journal of Clinical Investigation, 2014 (PMID: 24382344) [6] Falkenberg and Johnstone, Nature Reviews Drug Discovery, 2014 (PMID: 25124585) [7] Eckschlager et al., International Journal of Molecular Sciences, 2017 (PMID: 28841160) [8] FDA Drug Labels (Vorinostat, Romidepsin)

Other names
Class I histone deacetylasesHD1RPD3HDAC1HDAC3HDAC8
02

Mechanism of action

Inhibition of the zinc-dependent catalytic domain of histone deacetylases, preventing the removal of acetyl groups from lysine residues on histones and non-histone proteins, leading to hyperacetylation and transcriptional activation of suppressed genes.

03

Biological functions

Epigenetic regulationGene expression regulationCell cycle regulationApoptosisDNA repairChromatin remodeling
04

Disease associations

CancerHematological malignancySolid tumorNeurodegenerative diseaseInflammation
05

Safety considerations

ThrombocytopeniaNeutropeniaGastrointestinal toxicity (nausea, diarrhea)FatigueQT interval prolongationAnemia
06

Interacting drugs

Vorinostat

7 more in the full profile.

07

Biomarkers

Histone H3 acetylationHistone H4 acetylationp21 (WAF1/CIP1) expressionHR23B protein levels

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