Target intelligence / Profile preview

Histone deacetylase 2 (HDAC2) (HDAC2)

Target
HDAC2
Molecular classification
Enzyme, Histone modification, Class I histone deacetylase, Zinc-dependent deacetylase
01

Overview

Histone deacetylase 2 (HDAC2) is a Class I enzyme that plays a critical role in epigenetic regulation by removing acetyl groups from lysine residues on histone tails [1]. This deacetylation process promotes chromatin condensation, which typically leads to the transcriptional repression of various genes [2]. HDAC2 is often found within large multi-protein complexes like NuRD and Sin3, which are essential for its stability and recruitment to specific DNA sites [3]. In many types of cancer, HDAC2 is overexpressed, contributing to the silencing of tumor suppressor genes and promoting uncontrolled cell proliferation [4]. Beyond oncology, HDAC2 has been identified as a key negative regulator of synaptic plasticity and memory formation, making it a target for treating neurodegenerative diseases like Alzheimer's [5]. Sodium propionate is a short-chain fatty acid that functions as a non-selective inhibitor of HDAC2 and other Class I and IIa HDACs [6]. By inhibiting the enzymatic activity of HDAC2, sodium propionate induces histone hyperacetylation, which can restore the expression of silenced genes and exert anti-inflammatory effects [7]. Therapeutic targeting of HDAC2 with small molecules like sodium propionate or more potent synthetic inhibitors remains a significant area of research for both cancer and cognitive disorders [8].

Other names
HDAC2RPD3Histone deacetylase 2Mammalian RPD3
02

Mechanism of action

Histone deacetylase 2 (HDAC2) catalyzes the removal of acetyl groups from the N-terminal lysine residues of histones H3 and H4, facilitating chromatin condensation and transcriptional repression [1, 2]. Sodium propionate acts as a competitive inhibitor that binds to the zinc-containing catalytic site of the enzyme, preventing deacetylation and leading to histone hyperacetylation and the activation of previously silenced genes [6, 7].

03

Biological functions

Epigenetic regulationGene silencingCell cycle regulationApoptosisDNA repairSynaptic plasticity
04

Disease associations

CancerAlzheimer's diseaseInflammationCardiac hypertrophyAsthma
05

Safety considerations

Lack of isoform selectivity leading to off-target effectsGastrointestinal toxicity (nausea, diarrhea)Hematological adverse effects (thrombocytopenia, neutropenia)Potential cardiac toxicity (QT interval prolongation)Fatigue and anorexia
06

Interacting drugs

Sodium propionate

7 more in the full profile.

07

Biomarkers

Acetylated Histone H3 (H3K9ac)Acetylated Histone H4 (H4K12ac)HDAC2 protein expression levelsp21/WAF1 expression

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