Target intelligence / Profile preview

Histone-lysine N-methyltransferase 2B (KMT2B)

Target
KMT2B
Molecular classification
Enzyme, Histone methyltransferase, Epigenetic regulator, Histone modification
01

Overview

Histone-lysine N-methyltransferase 2B (KMT2B) is a large, multidomain enzyme responsible for catalyzing the trimethylation of histone H3 at lysine 4 (H3K4), a key epigenetic mark linked to transcriptional activation[1][2][3]. KMT2B is part of the KMT2/MLL family and forms COMPASS complexes with WRAD and menin, among other cofactors, to regulate gene expression, especially genes involved in embryonic development, neuronal and muscle differentiation, and hematopoiesis[2][3]. Through its methyltransferase activity, it maintains active chromatin states at CpG island promoters, protects against DNA methylation, and ensures transcriptional readiness of developmentally regulated genes[1][2]. Mutations or dysregulation in KMT2B are causative for hereditary dystonias and have been implicated in a range of cancers and inflammatory or neurodegenerative conditions[2]. KMT2B is currently considered a promising but challenging therapeutic target in epigenetic and disease modulation, with safety concerns stemming from its central role in gene regulation and development[2].

Other names
Histone-lysine N-methyltransferase 2BKMT2BMLL2MLL4HRX2KIAA0304TRX2WBP7Lysine N-methyltransferase 2BMyeloid/lymphoid or mixed-lineage leukemia protein 4Trithorax homolog 2WW domain-binding protein 7CXXC10DYT28MRD68Mixed lineage leukemia gene homolog 2
02

Mechanism of action

Inhibition of H3K4 methyltransferase activity, leading to altered gene expression via reduced H3K4 trimethylation and chromatin remodeling[2][3] Potential reactivation of gene promoters by impacting DNA methylation protection mechanisms[1]

03

Biological functions

Regulation of gene transcriptionChromatin remodelingEmbryonic developmentHematopoiesisNeural developmentMaintenance of active chromatin and unmethylated CpG island promotersCell differentiationImmune response (macrophage cytokine signaling)
04

Disease associations

Cancer (colorectal, gastric, uterine corpus endometrial, esophageal sarcomatoid, head and neck squamous cell)Neurodevelopmental disorder (e.g., childhood dystonia)Neurodegenerative disease (e.g., Alzheimer’s disease, Lewy body dementia)Inflammatory disorders (including myocardial ischemia-reperfusion, neuroinflammation)
05

Safety considerations

Potential for impaired embryonic development, neural and hematopoietic defects if inhibited[2]Risk of inducing epigenetic gene silencing or activating oncogenic gene expression in off-target tissuesMay increase risk of neurodegeneration or trigger immune/inflammatory cascades if misregulated[2]
06

Biomarkers

KMT2B mutation or loss-of-function (for dystonia and developmental syndromes)KMT2B expression (as a potential oncogenic marker in relevant cancers)H3K4me3 levels (as a readout of methyltransferase activity at particular promoters)[2]

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