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Inhibitor of DNA binding 2B (ID2B)

Target
ID2B
Molecular classification
Helix-loop-helix (HLH) family protein, Transcriptional regulator (dominant-negative of bHLH proteins), Intrinsically disordered protein (IDP)
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Overview

Inhibitor of DNA binding 2B (ID2B) is a member of the helix-loop-helix family of transcriptional regulators, primarily identified in fish and zebrafish genomes. It acts as a dominant-negative modulator by binding and inactivating bHLH transcription factors, thereby preventing their DNA binding and suppressing cell differentiation and development. In zebrafish, ID2B is expressed in the endocardium and is crucial for heart valve morphogenesis and cardiac contractility; loss of ID2B results in severe cardiac defects and lethality. ID2B also has roles in sex determination in some fish species, with male-biased expression and conservation/divergence compared to paralogs. In mammals, ID2, not ID2B, is the relevant homolog, and this protein is therapeutically targeted for cancer; homoharringtonine can decrease levels of ID2 protein, providing a basis for potential drug development. The label "ID2B" is misleading for human drug development; the canonical therapeutic target is "Inhibitor of DNA binding 2" (ID2). For most human or mammalian biomedical contexts, "ID2B" is not a valid target; refer instead to "Inhibitor of DNA binding 2 (ID2)." "ID2B" is a species-specific variant/paralog relevant to zebrafish and fish biology, not currently recognized in human gene nomenclature.

Other names
ID2Bid2binhibitor of DNA-binding 2bPutative DNA-binding protein inhibitor ID-2Binhibitor of differentiation 2Bid2bbY
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Mechanism of action

Inhibition of protein synthesis, leading to decreased levels of ID proteins; Blockade of bHLH-directed transcription, suppressing cell differentiation

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Biological functions

Negative regulation of bHLH transcription factorsSuppression of cell differentiationRegulation of cell proliferationRegulation of developmental processes (including heart morphogenesis in zebrafish, sex determination in fish)
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Disease associations

Cardiovascular development disorders (zebrafish, due to loss-of-function mutations)Sex determination and gonadal development (fish)Cancer (for ID2, not ID2B; see human paralog reference)
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Safety considerations

Essential for embryonic heart development—genetic deletion causes lethal malformations in the heart (zebrafish)Misspecification of target ("ID2B" instead of "ID2") may lead to incorrect interpretation and therapeutic targeting
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Interacting drugs

Homoharringtonine (ID2 protein in mammalian cancers; effect on ID family, not directly validated for ID2B in fish)
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Biomarkers

Expression levels of ID2B in endocardial cells (zebrafish, as developmental biomarker for cardiac morphogenesis)Male-biased expression of ID2B or related paralogs (fish, as biomarker for sex determination)

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