Target intelligence / Profile preview

Integration host factor (IHF)

Target
IHF
Molecular classification
Transcription factor [4, 5, 11, 12], DNA-binding protein [6, 7, 11], Nucleoid-associated protein [7, 11], Architectural protein [4, 7]
01

Overview

Integration host factor (IHF) is a small, heterodimeric nucleoid-associated protein (NAP) primarily found in Gram-negative bacteria, consisting of alpha (IHFα) and beta (IHFβ) subunits [6, 11]. It functions as a global architectural and regulatory protein that binds to specific DNA sequences, inducing sharp bends (exceeding 160 degrees) to facilitate processes such as site-specific recombination, DNA replication, and transcription [7, 10, 31]. Beyond its intracellular roles, IHF is a critical structural component of the extracellular DNA (eDNA) matrix in bacterial biofilms, where it stabilizes the mesh-like framework that protects pathogens from the host immune system and antibiotics [1, 2, 3]. Therapeutic strategies targeting IHF, such as the humanized monoclonal antibodies CMTX-101 and TRL1068, aim to destabilize this biofilm matrix by sequestering IHF, leading to its rapid collapse and the release of bacteria into a more susceptible planktonic state [23, 24, 25]. This approach has shown promise in enhancing the efficacy of traditional antibiotics against chronic and recurrent infections, including those caused by Haemophilus influenzae, Pseudomonas aeruginosa, and Escherichia coli [2, 24, 25]. By targeting a broadly conserved structural element, IHF-directed therapies offer a pathogen-agnostic method to combat antimicrobial resistance and improve treatment outcomes for biofilm-mediated diseases [23, 26].

Other names
DNABII family proteinNucleoid-associated proteinHistone-like proteinHimA (alpha subunit)HimD (beta subunit)IHFalphaIHFbeta
02

Mechanism of action

Biofilm disruption by sequestering IHF from the extracellular DNA (eDNA) matrix, leading to structural collapse of the biofilm and increased bacterial susceptibility to antibiotics and host immune clearance [2, 23, 25].

03

Biological functions

Transcription [4, 11, 31]DNA replication [6, 10, 33]DNA bending [7, 10]Site-specific recombination [6, 10, 17]Biofilm formation and stabilization [1, 2, 3, 8]Acid resistance [13]Virulence factor regulation [5, 12, 15]
04

Disease associations

Infection [1, 2, 3, 5]Biofilm-associated diseases (e.g., cystic fibrosis, otitis media, osteomyelitis, urinary tract infections) [1, 2, 3, 25]Antimicrobial resistance [4, 23, 26]
05

Safety considerations

Potential impact on commensal bacterial populations [1]Delivery challenges to deep-seated or medical device-associated biofilms [1, 22]Potential for immune-mediated reactions to therapeutic antibodies [38]Complexity of treating polymicrobial biofilms [1]
06

Interacting drugs

CMTX-101 [23, 25]

2 more in the full profile.

07

Biomarkers

Biofilm presence and density in clinical specimens [1, 23]IHF expression levels in bacterial isolates [5, 12]Antibody titer against DNABII proteins [25]Bacterial load reduction post-treatment [2, 25]

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