Target intelligence / Profile preview

Integrator complex cleavage module (ICM)

Target
ICM
Molecular classification
Enzyme, Endonuclease, Protein complex, Metallo-beta-lactamase (MBL) family
01

Overview

The Integrator complex cleavage module (ICM) is a specialized three-subunit protein assembly within the larger Integrator complex, consisting of the catalytic endonuclease Integrator complex subunit 11 (INTS11) and its stabilizing partners INTS9 and INTS4. It functions primarily as an RNA endonuclease that mediates the 3'-end processing of small nuclear RNAs (snRNAs) and regulates the termination of nascent transcripts at protein-coding genes and enhancers. By cleaving RNA as it emerges from RNA polymerase II, the ICM acts as a critical checkpoint for transcriptional attenuation and the biogenesis of various non-coding RNAs. Dysregulation of the ICM is heavily implicated in human disease, particularly in neurodevelopmental disorders where mutations in its subunits lead to severe cognitive and motor deficits. In oncology, the ICM is recognized as a significant therapeutic dependency; for instance, INTS11 has been identified as a synthetic lethal target in 1p36-deleted cancers such as glioblastoma and neuroblastoma. While no FDA-approved drugs currently target the ICM, experimental small-molecule inhibitors targeting the metallo-beta-lactamase domain of INTS11 are under investigation as potential precision medicines for transcription-dependent malignancies.

Other names
Integrator catalytic moduleIntegrator endonuclease moduleINTS4/9/11 complexIntegrator catalytic coreIntegrator nuclease module
02

Mechanism of action

Endonucleolytic cleavage of nascent RNA transcripts to facilitate 3'-end maturation or premature transcription termination.

03

Biological functions

RNA processing3'-end processing of small nuclear RNA (snRNA)Transcription terminationTranscription attenuationRNA polymerase II pause-release regulationEnhancer RNA (eRNA) processingLong non-coding RNA (lncRNA) processing
04

Disease associations

CancerGlioblastomaLeukemiaGastric cancerNeurodevelopmental disorderDevelopmental and epileptic encephalopathyHepatocellular carcinoma
05

Safety considerations

Essentiality for basic cellular RNA processing (snRNA biogenesis) may lead to systemic toxicityPotential off-target inhibition of homologous RNA processing enzymes like CPSF73Disruption of global transcriptional homeostasis
06

Interacting drugs

Compound A (experimental INTS11 inhibitor)
07

Biomarkers

INTS11 expression levelssnRNA readthrough (e.g., U7 snRNA processing efficiency)1p36 chromosomal deletion status

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