Target intelligence / Profile preview

Long intergenic non-protein coding RNA 539 (LINC00539)

Target
LINC00539
Molecular classification
Long non-coding RNA (lncRNA), Other (Non-coding RNA family)
01

Overview

Long intergenic non-protein coding RNA 539 (LINC00539) is a human long non-coding RNA gene (HGNC:4367, Ensembl: ENSG00000224429) that does not encode a protein but instead regulates gene expression and cellular behavior through RNA-mediated mechanisms[1][5][7]. LINC00539 is upregulated in glioma and correlated with aggressive disease features such as vasculogenic mimicry – the ability of cancer cells to form vessel-like structures independent of classical angiogenesis. Mechanistically, LINC00539 acts as a competing endogenous RNA (molecular sponge) to modulate miR-539-5p levels, thereby indirectly regulating key oncogenic factors such as TWIST1 and matrix metalloproteinases (MMP-2, MMP-14), contributing to tumor proliferation, migration, invasion, and tube formation[2]. While not a direct therapeutic target in current clinical practice, LINC00539 may represent a candidate for future RNA-based interventions and a biomarker for glioma progression.

Other names
LINC00539LINC00422Long intergenic non-protein coding RNA 422HSALNG0095595
02

Mechanism of action

Not applicable (no direct drugs known). For lncRNA-based intervention, typical mechanisms would include antisense oligonucleotides, RNA interference, or targeted gene editing. For LINC00539, functional modulation would likely involve altering its expression or interfering with its ability to act as a molecular sponge for specific miRNAs (e.g., miR-539-5p)

03

Biological functions

Regulation of gene expressionModulation of cell proliferationModulation of cell migration and invasionCompeting endogenous RNA/miRNA spongeOther (specific regulatory functions in tumors)
04

Disease associations

Cancer (glioma; evidence for role in vasculogenic mimicry and tumor progression)Other (potentially involved in disease-related gene expression profiles; more broadly, lncRNAs participate in various pathologies, but direct evidence here is for glioma)
05

Safety considerations

None noted specifically for therapeutic targeting (as no drugs/interventions are currently approved or in use). Generally, targeting lncRNAs carries risks of off-target effects and unintended gene regulation.
06

Biomarkers

Overexpression in glioma as a *possible* biomarker for high-grade glioma, specifically for vasculogenic mimicry formation and progression

Beyond the preview

Go deeper on Long intergenic non-protein coding RNA 539 (LINC00539).

Explore the evidence, development activity, and competitive landscape with Gosset’s full data platform.

Drug pipeline

Full profile access

Explore the programs pursuing this target and their development progress.

  • Drug candidates
  • Developers
  • Development stage

Clinical trials

Full profile access

Follow the clinical studies evaluating therapies directed at this target.

  • Trial design
  • Status
  • Readouts

Competitive landscape

Full profile access

Compare approaches across drug candidates, modalities, and indications.

  • Programs
  • Modalities
  • Indications

Literature & evidence

Full profile access

Investigate the research and source evidence behind target biology and development.

  • Publications
  • Sources
  • Analysis

Patents

Full profile access

Explore patent activity around therapies and technologies addressing this target.

  • Patents
  • Assignees
  • Technologies

Research & analysis

Full profile access

Connect target biology, drug development, and emerging evidence in your research.

  • Biology
  • Development news
  • Analysis

Bring the full picture into focus.

See how Gosset can support your research on Long intergenic non-protein coding RNA 539 (LINC00539).

Explore the full profile

Gosset Free

Get started with Gosset.

Enter your work email and we’ll be in touch with next steps.

Work email preferred.

Book a call