Target intelligence / Profile preview

Lysine-specific demethylase 2A (KDM2A)

Target
KDM2A
Molecular classification
Enzyme, Histone demethylase, Epigenetic modulator, Jumonji C (JmjC) domain-containing protein
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Overview

Lysine-specific demethylase 2A (KDM2A) is a Jumonji C (JmjC) domain-containing enzyme that demethylates mono- and dimethylated lysine 36 on histone H3 (H3K36me1/2)[1][2][4]. It also contains F-box and leucine-rich repeat motifs, and forms part of SCF (SKP1-cullin-F-box) ubiquitin-ligase complexes that regulate protein stability. KDM2A is a key epigenetic regulator, involved in chromatin remodeling, gene transcription, cell proliferation, and differentiation[1][2]. It is essential for maintaining heterochromatin stability, DNA damage repair, and proper gene expression. Dysregulation of KDM2A contributes to tumorigenesis and cancer progression, particularly in breast and lung cancers, by promoting stemness and angiogenesis[6][5]. KDM2A has been proposed as a prognostic biomarker and a potential therapeutic target, but its broad role in chromatin biology highlights the need for caution in targeting it pharmacologically.

Other names
F-box and leucine-rich repeat protein 11 (FBXL11)Histone lysine demethylase KDM2AKDM2A
02

Mechanism of action

Demethylation of histone H3 at lysine 36 (H3K36), leading to regulation of gene transcription[1][2][4]. Modulation of chromatin accessibility and structure. Interaction with ubiquitin-ligase complexes (SCF), promoting ubiquitination and degradation of target proteins[2][1].

03

Biological functions

Chromosome remodelingGene transcription regulationCell proliferationCell differentiationEpigenetic regulationDNA damage repairCell metabolism
04

Disease associations

Cancer (e.g., breast cancer, lung cancer, esophageal squamous cell carcinoma)TumorigenesisOther (evidence for various malignancies and possibly metabolic disorders)
05

Safety considerations

Targeting KDM2A may affect global chromatin states, potentially resulting in off-target gene dysregulation[1]Potential interference with DNA damage repair and genomic stability[1]Modulation of cancer cell stemness and proliferation, raising risk of tumorigenic side effects[6]
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Interacting drugs

Daminozide
07

Biomarkers

Overexpression of KDM2A in tumor tissue as a prognostic marker for breast cancer and lung cancer progression[6]Expression of downstream targets such as JAG1 in cancer[6]

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